(14 nodes) Glycosyl transferase family 2 network (Burkholderia stagnalis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AOK52944.1	UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
	AOK53141.1	Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
	AOK57653.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)
	AOK53831.1	Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	AOK55723.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
	AOK55940.1	Bactoprenol glucosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (366 aa)
	AOK55735.1	Bactoprenol glucosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
	pgaC	Poly-beta-1,6 N-acetyl-D-glucosamine synthase; Predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (423 aa)
	AOK52011.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
	AOK52025.1	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
	AOK52281.1	Ceramide glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (390 aa)
	AOK56965.1	Rhamnosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
	AOK52436.1	Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (583 aa)
	AOK52486.1	Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (845 aa)

Your Current Organism:

Burkholderia stagnalis

NCBI taxonomy Id: 1503054
Other names: B. stagnalis, Burkholderia sp. Bp6893, Burkholderia sp. Bp6916, Burkholderia sp. Bp7118, Burkholderia sp. Bp7119, Burkholderia sp. Bp7120, Burkholderia sp. Bp7137, Burkholderia sp. Bp7139, Burkholderia sp. Bp7142, Burkholderia sp. Bp7143, Burkholderia sp. Bp7145, Burkholderia sp. Bp7260, Burkholderia sp. Bp7266, Burkholderia sp. Bp7278, Burkholderia sp. Bp7280, Burkholderia sp. Bp7282, Burkholderia sp. Bp7288, Burkholderia sp. Bp7466, Burkholderia sp. Bp7469, Burkholderia sp. Bp7471, Burkholderia sp. Bp7483, Burkholderia sp. Bp7485, Burkholderia sp. Bp7491, Burkholderia sp. Bp7519, Burkholderia sp. Bp7520, Burkholderia sp. Bp7521, Burkholderia sp. Bp7554, Burkholderia sp. Bp7555, Burkholderia sp. Bp7571, Burkholderia sp. Bp7572, Burkholderia sp. Bp7635, Burkholderia sp. Bp7636, Burkholderia sp. Bp7639, Burkholderia sp. Bp7640, Burkholderia sp. Bp7641, Burkholderia sp. Bp7642, Burkholderia sp. Bp7643, Burkholderia sp. Bp7644, Burkholderia sp. Bp7645, Burkholderia sp. Bp7651, Burkholderia sp. Bp7656, Burkholderia sp. Bp7657, Burkholderia sp. Bp7658, Burkholderia sp. Bp7663, Burkholderia sp. Bp7665, Burkholderia sp. Bp7666, Burkholderia sp. Bp7667, Burkholderia sp. Bp7670, Burkholderia sp. Bp7671, Burkholderia sp. Bp7673, Burkholderia sp. Bp7681, Burkholderia sp. Bp7682, Burkholderia sp. Bp7684, Burkholderia sp. Bp7685, Burkholderia sp. Bp7686, Burkholderia sp. Bp7687, Burkholderia sp. Bp7690, Burkholderia sp. Bp7692, Burkholderia sp. Bp7693, Burkholderia sp. Bp7694, Burkholderia sp. Bp7697, Burkholderia sp. Bp7698, Burkholderia sp. Bp7699, Burkholderia sp. Bp7705, Burkholderia sp. Bp7707, Burkholderia sp. LMG 28156, Burkholderia sp. LMG 28157, Burkholderia sp. R-52095, Burkholderia sp. R-52096, Burkholderia sp. R-52235, Burkholderia sp. R-52237, Burkholderia sp. R-52238, Burkholderia sp. R-52240, Burkholderia stagnalis De Smet et al. 2015, CCUG 65686, LMG 28156, LMG:28156

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AOK52011.1	AOK52025.1	WT74_04305	WT74_04385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.461
AOK52025.1	AOK52011.1	WT74_04385	WT74_04305	Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.461
AOK52281.1	AOK57653.1	WT74_05875	WT74_32420	Ceramide glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
AOK57653.1	AOK52281.1	WT74_32420	WT74_05875	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ceramide glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741

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