STRINGSTRING
secD secD AOK52303.1 AOK52303.1 AOK52351.1 AOK52351.1 AOK52361.1 AOK52361.1 AOK52440.1 AOK52440.1 AOK52712.1 AOK52712.1 AOK53694.1 AOK53694.1 AOK53837.1 AOK53837.1 AOK55256.1 AOK55256.1 AOK56426.1 AOK56426.1 AOK56668.1 AOK56668.1 AOK57153.1 AOK57153.1 AOK57371.1 AOK57371.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
secDPreprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. (671 aa)
AOK52303.1Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1037 aa)
AOK52351.1Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. (1047 aa)
AOK52361.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (786 aa)
AOK52440.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (804 aa)
AOK52712.1Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1045 aa)
AOK53694.1Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1066 aa)
AOK53837.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (823 aa)
AOK55256.1Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology. (1030 aa)
AOK56426.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1060 aa)
AOK56668.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1057 aa)
AOK57153.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (1066 aa)
AOK57371.1RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (877 aa)
Your Current Organism:
Burkholderia stagnalis
NCBI taxonomy Id: 1503054
Other names: B. stagnalis, Burkholderia sp. Bp6893, Burkholderia sp. Bp6916, Burkholderia sp. Bp7118, Burkholderia sp. Bp7119, Burkholderia sp. Bp7120, Burkholderia sp. Bp7137, Burkholderia sp. Bp7139, Burkholderia sp. Bp7142, Burkholderia sp. Bp7143, Burkholderia sp. Bp7145, Burkholderia sp. Bp7260, Burkholderia sp. Bp7266, Burkholderia sp. Bp7278, Burkholderia sp. Bp7280, Burkholderia sp. Bp7282, Burkholderia sp. Bp7288, Burkholderia sp. Bp7466, Burkholderia sp. Bp7469, Burkholderia sp. Bp7471, Burkholderia sp. Bp7483, Burkholderia sp. Bp7485, Burkholderia sp. Bp7491, Burkholderia sp. Bp7519, Burkholderia sp. Bp7520, Burkholderia sp. Bp7521, Burkholderia sp. Bp7554, Burkholderia sp. Bp7555, Burkholderia sp. Bp7571, Burkholderia sp. Bp7572, Burkholderia sp. Bp7635, Burkholderia sp. Bp7636, Burkholderia sp. Bp7639, Burkholderia sp. Bp7640, Burkholderia sp. Bp7641, Burkholderia sp. Bp7642, Burkholderia sp. Bp7643, Burkholderia sp. Bp7644, Burkholderia sp. Bp7645, Burkholderia sp. Bp7651, Burkholderia sp. Bp7656, Burkholderia sp. Bp7657, Burkholderia sp. Bp7658, Burkholderia sp. Bp7663, Burkholderia sp. Bp7665, Burkholderia sp. Bp7666, Burkholderia sp. Bp7667, Burkholderia sp. Bp7670, Burkholderia sp. Bp7671, Burkholderia sp. Bp7673, Burkholderia sp. Bp7681, Burkholderia sp. Bp7682, Burkholderia sp. Bp7684, Burkholderia sp. Bp7685, Burkholderia sp. Bp7686, Burkholderia sp. Bp7687, Burkholderia sp. Bp7690, Burkholderia sp. Bp7692, Burkholderia sp. Bp7693, Burkholderia sp. Bp7694, Burkholderia sp. Bp7697, Burkholderia sp. Bp7698, Burkholderia sp. Bp7699, Burkholderia sp. Bp7705, Burkholderia sp. Bp7707, Burkholderia sp. LMG 28156, Burkholderia sp. LMG 28157, Burkholderia sp. R-52095, Burkholderia sp. R-52096, Burkholderia sp. R-52235, Burkholderia sp. R-52237, Burkholderia sp. R-52238, Burkholderia sp. R-52240, Burkholderia stagnalis De Smet et al. 2015, CCUG 65686, LMG 28156, LMG:28156
Server load: low (30%) [HD]