15 items (Panicum hallii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GQ55_9G089500	Histone H2A; Belongs to the histone H2A family. (137 aa)
	GQ55_9G599000	HIT-type domain-containing protein. (173 aa)
	GQ55_6G002400	YL1_C domain-containing protein. (392 aa)
	GQ55_6G097500	Enhancer of polycomb-like protein. (829 aa)
	GQ55_5G384100	BCNT-C domain-containing protein. (266 aa)
	GQ55_4G013500	Uncharacterized protein. (341 aa)
	GQ55_4G346100	Uncharacterized protein. (243 aa)
	GQ55_3G187400	SANT domain-containing protein. (440 aa)
	GQ55_2G064700	Uncharacterized protein. (241 aa)
	GQ55_2G201200	Enhancer of polycomb-like protein. (468 aa)
	GQ55_2G412800	RuvB-like helicase; Belongs to the RuvB family. (478 aa)
	GQ55_2G441900	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (443 aa)
	GQ55_1G127400	MRG domain-containing protein. (323 aa)
	GQ55_1G346400	Uncharacterized protein. (2031 aa)
	GQ55_1G357600	Uncharacterized protein. (170 aa)

Your Current Organism:

Panicum hallii

NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GQ55_1G127400	GQ55_1G346400	A0A2T7F4Y6	A0A2T7FAN5	MRG domain-containing protein.	Uncharacterized protein.	0.957
GQ55_1G127400	GQ55_1G357600	A0A2T7F4Y6	A0A2T7FB28	MRG domain-containing protein.	Uncharacterized protein.	0.978
GQ55_1G127400	GQ55_2G064700	A0A2T7F4Y6	A0A2T7EM37	MRG domain-containing protein.	Uncharacterized protein.	0.872
GQ55_1G127400	GQ55_2G201200	A0A2T7F4Y6	A0A2T7EQN8	MRG domain-containing protein.	Enhancer of polycomb-like protein.	0.972
GQ55_1G127400	GQ55_2G412800	A0A2T7F4Y6	A0A2T7EXU9	MRG domain-containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.936
GQ55_1G127400	GQ55_2G441900	A0A2T7F4Y6	A0A2T7EYX2	MRG domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.992
GQ55_1G127400	GQ55_3G187400	A0A2T7F4Y6	A0A2T7EB13	MRG domain-containing protein.	SANT domain-containing protein.	0.979
GQ55_1G127400	GQ55_4G013500	A0A2T7F4Y6	A0A2T7DU44	MRG domain-containing protein.	Uncharacterized protein.	0.872
GQ55_1G127400	GQ55_4G346100	A0A2T7F4Y6	A0A2T7E390	MRG domain-containing protein.	Uncharacterized protein.	0.872
GQ55_1G127400	GQ55_6G002400	A0A2T7F4Y6	A0A2T7D2E1	MRG domain-containing protein.	YL1_C domain-containing protein.	0.973
GQ55_1G127400	GQ55_6G097500	A0A2T7F4Y6	A0A2T7D5J5	MRG domain-containing protein.	Enhancer of polycomb-like protein.	0.972
GQ55_1G127400	GQ55_9G089500	A0A2T7F4Y6	A0A2T7C1H1	MRG domain-containing protein.	Histone H2A; Belongs to the histone H2A family.	0.878
GQ55_1G127400	GQ55_9G599000	A0A2T7F4Y6	A0A2T7CH15	MRG domain-containing protein.	HIT-type domain-containing protein.	0.836
GQ55_1G346400	GQ55_1G127400	A0A2T7FAN5	A0A2T7F4Y6	Uncharacterized protein.	MRG domain-containing protein.	0.957
GQ55_1G346400	GQ55_1G357600	A0A2T7FAN5	A0A2T7FB28	Uncharacterized protein.	Uncharacterized protein.	0.545
GQ55_1G346400	GQ55_2G064700	A0A2T7FAN5	A0A2T7EM37	Uncharacterized protein.	Uncharacterized protein.	0.905
GQ55_1G346400	GQ55_2G201200	A0A2T7FAN5	A0A2T7EQN8	Uncharacterized protein.	Enhancer of polycomb-like protein.	0.914
GQ55_1G346400	GQ55_2G412800	A0A2T7FAN5	A0A2T7EXU9	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.983
GQ55_1G346400	GQ55_2G441900	A0A2T7FAN5	A0A2T7EYX2	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.948
GQ55_1G346400	GQ55_3G187400	A0A2T7FAN5	A0A2T7EB13	Uncharacterized protein.	SANT domain-containing protein.	0.994