7 items (Panicum hallii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GQ55_5G204900	TAFII28 domain-containing protein. (208 aa)
	GQ55_5G224500	TAFII55_N domain-containing protein. (199 aa)
	GQ55_5G296500	TAF domain-containing protein. (540 aa)
	GQ55_5G342900	Uncharacterized protein. (179 aa)
	GQ55_4G069700	Uncharacterized protein. (1806 aa)
	GQ55_2G251900	Peptidase_M1 domain-containing protein. (1380 aa)
	GQ55_2G263300	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. (157 aa)

Your Current Organism:

Panicum hallii

NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GQ55_2G251900	GQ55_2G263300	A0A2T7ES60	A0A2T7ESJ7	Peptidase_M1 domain-containing protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.999
GQ55_2G251900	GQ55_4G069700	A0A2T7ES60	A0A2T7DW19	Peptidase_M1 domain-containing protein.	Uncharacterized protein.	0.999
GQ55_2G251900	GQ55_5G204900	A0A2T7ES60	A0A2T7DIF2	Peptidase_M1 domain-containing protein.	TAFII28 domain-containing protein.	0.999
GQ55_2G251900	GQ55_5G224500	A0A2T7ES60	A0A2T7DJ31	Peptidase_M1 domain-containing protein.	TAFII55_N domain-containing protein.	0.999
GQ55_2G251900	GQ55_5G296500	A0A2T7ES60	A0A2T7DLF9	Peptidase_M1 domain-containing protein.	TAF domain-containing protein.	0.999
GQ55_2G251900	GQ55_5G342900	A0A2T7ES60	A0A2T7DM49	Peptidase_M1 domain-containing protein.	Uncharacterized protein.	0.999
GQ55_2G263300	GQ55_2G251900	A0A2T7ESJ7	A0A2T7ES60	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	Peptidase_M1 domain-containing protein.	0.999
GQ55_2G263300	GQ55_4G069700	A0A2T7ESJ7	A0A2T7DW19	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	Uncharacterized protein.	0.999
GQ55_2G263300	GQ55_5G204900	A0A2T7ESJ7	A0A2T7DIF2	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	TAFII28 domain-containing protein.	0.999
GQ55_2G263300	GQ55_5G224500	A0A2T7ESJ7	A0A2T7DJ31	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	TAFII55_N domain-containing protein.	0.999
GQ55_2G263300	GQ55_5G296500	A0A2T7ESJ7	A0A2T7DLF9	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	TAF domain-containing protein.	0.999
GQ55_2G263300	GQ55_5G342900	A0A2T7ESJ7	A0A2T7DM49	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	Uncharacterized protein.	0.999
GQ55_4G069700	GQ55_2G251900	A0A2T7DW19	A0A2T7ES60	Uncharacterized protein.	Peptidase_M1 domain-containing protein.	0.999
GQ55_4G069700	GQ55_2G263300	A0A2T7DW19	A0A2T7ESJ7	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.999
GQ55_4G069700	GQ55_5G204900	A0A2T7DW19	A0A2T7DIF2	Uncharacterized protein.	TAFII28 domain-containing protein.	0.999
GQ55_4G069700	GQ55_5G224500	A0A2T7DW19	A0A2T7DJ31	Uncharacterized protein.	TAFII55_N domain-containing protein.	0.999
GQ55_4G069700	GQ55_5G296500	A0A2T7DW19	A0A2T7DLF9	Uncharacterized protein.	TAF domain-containing protein.	0.999
GQ55_4G069700	GQ55_5G342900	A0A2T7DW19	A0A2T7DM49	Uncharacterized protein.	Uncharacterized protein.	0.999
GQ55_5G204900	GQ55_2G251900	A0A2T7DIF2	A0A2T7ES60	TAFII28 domain-containing protein.	Peptidase_M1 domain-containing protein.	0.999
GQ55_5G204900	GQ55_2G263300	A0A2T7DIF2	A0A2T7ESJ7	TAFII28 domain-containing protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.999