15 items (Panicum hallii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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protein homology

Your Input:
	GQ55_9G074500	Uncharacterized protein. (306 aa)
	GQ55_9G446900	Uncharacterized protein. (230 aa)
	GQ55_7G077300	Uncharacterized protein. (393 aa)
	GQ55_7G314000	Uncharacterized protein. (425 aa)
	GQ55_5G040200	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (112 aa)
	GQ55_5G084400	TFIID_20kDa domain-containing protein. (508 aa)
	GQ55_5G093500	TFIID_20kDa domain-containing protein. (561 aa)
	GQ55_5G296500	TAF domain-containing protein. (540 aa)
	GQ55_3G382500	SGF29 C-terminal domain-containing protein. (281 aa)
	GQ55_3G450600	Uncharacterized protein. (323 aa)
	GQ55_2G090400	TFIID_20kDa domain-containing protein. (496 aa)
	GQ55_2G263300	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. (157 aa)
	GQ55_2G431200	Uncharacterized protein. (190 aa)
	GQ55_2G455600	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3872 aa)
	GQ55_1G223000	Uncharacterized protein. (379 aa)

Your Current Organism:

Panicum hallii

NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GQ55_2G090400	GQ55_2G263300	A0A2T7EMZ5	A0A2T7ESJ7	TFIID_20kDa domain-containing protein.	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	0.982
GQ55_2G090400	GQ55_2G431200	A0A2T7EMZ5	A0A2T7EYH8	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.967
GQ55_2G090400	GQ55_2G455600	A0A2T7EMZ5	A0A2T7EZF3	TFIID_20kDa domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.969
GQ55_2G090400	GQ55_3G382500	A0A2T7EMZ5	A0A2T7EGE4	TFIID_20kDa domain-containing protein.	SGF29 C-terminal domain-containing protein.	0.967
GQ55_2G090400	GQ55_3G450600	A0A2T7EMZ5	A0A2T7EIG0	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.794
GQ55_2G090400	GQ55_5G040200	A0A2T7EMZ5	A0A2T7DCM2	TFIID_20kDa domain-containing protein.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.974
GQ55_2G090400	GQ55_5G093500	A0A2T7EMZ5	A0A2T7DEI0	TFIID_20kDa domain-containing protein.	TFIID_20kDa domain-containing protein.	0.948
GQ55_2G090400	GQ55_5G296500	A0A2T7EMZ5	A0A2T7DLF9	TFIID_20kDa domain-containing protein.	TAF domain-containing protein.	0.988
GQ55_2G090400	GQ55_9G074500	A0A2T7EMZ5	A0A2T7C0S5	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.794
GQ55_2G090400	GQ55_9G446900	A0A2T7EMZ5	A0A2T7CBL5	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.967
GQ55_2G263300	GQ55_2G090400	A0A2T7ESJ7	A0A2T7EMZ5	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	TFIID_20kDa domain-containing protein.	0.982
GQ55_2G263300	GQ55_2G431200	A0A2T7ESJ7	A0A2T7EYH8	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	Uncharacterized protein.	0.993
GQ55_2G263300	GQ55_2G455600	A0A2T7ESJ7	A0A2T7EZF3	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.999
GQ55_2G263300	GQ55_3G382500	A0A2T7ESJ7	A0A2T7EGE4	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	SGF29 C-terminal domain-containing protein.	0.977
GQ55_2G263300	GQ55_3G450600	A0A2T7ESJ7	A0A2T7EIG0	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	Uncharacterized protein.	0.784
GQ55_2G263300	GQ55_5G040200	A0A2T7ESJ7	A0A2T7DCM2	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]	0.989
GQ55_2G263300	GQ55_5G084400	A0A2T7ESJ7	A0A2T7DE93	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	TFIID_20kDa domain-containing protein.	0.982
GQ55_2G263300	GQ55_5G093500	A0A2T7ESJ7	A0A2T7DEI0	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	TFIID_20kDa domain-containing protein.	0.982
GQ55_2G263300	GQ55_5G296500	A0A2T7ESJ7	A0A2T7DLF9	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	TAF domain-containing protein.	0.999
GQ55_2G263300	GQ55_9G074500	A0A2T7ESJ7	A0A2T7C0S5	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family.	Uncharacterized protein.	0.784