44 items (Panicum hallii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GQ55_9G446900	Uncharacterized protein. (230 aa)
	GQ55_9G512700	Uncharacterized protein. (1402 aa)
	GQ55_7G050400	Deacetylase sirtuin-type domain-containing protein. (478 aa)
	GQ55_7G142700	N-acetyltransferase domain-containing protein. (133 aa)
	GQ55_6G249400	Bromo domain-containing protein. (643 aa)
	GQ55_5G052400	Uncharacterized protein. (1267 aa)
	GQ55_5G100400	RuvB-like helicase; Belongs to the RuvB family. (455 aa)
	GQ55_5G186200	WD_REPEATS_REGION domain-containing protein. (453 aa)
	GQ55_5G191500	Uncharacterized protein. (897 aa)
	GQ55_5G247300	N-acetyltransferase domain-containing protein. (179 aa)
	GQ55_5G271000	Uncharacterized protein. (1926 aa)
	GQ55_4G021300	Uncharacterized protein. (1509 aa)
	GQ55_4G069700	Uncharacterized protein. (1806 aa)
	GQ55_4G237600	Uncharacterized protein. (146 aa)
	GQ55_4G259000	Uncharacterized protein. (1275 aa)
	GQ55_4G324600	Uncharacterized protein. (137 aa)
	GQ55_4G346100	Uncharacterized protein. (243 aa)
	GQ55_3G046300	NAD-dependent protein deacylase; NAD-dependent protein deacylase. Catalyzes the NAD-dependent hydrolysis of acyl groups from lysine residues; Belongs to the sirtuin family. Class II subfamily. (410 aa)
	GQ55_3G060000	zf-C3Hc3H domain-containing protein. (258 aa)
	GQ55_3G074700	AB hydrolase-1 domain-containing protein. (232 aa)
	GQ55_3G132600	Uncharacterized protein. (198 aa)
	GQ55_3G146000	Uncharacterized protein. (1866 aa)
	GQ55_3G187400	SANT domain-containing protein. (440 aa)
	GQ55_3G209600	Uncharacterized protein. (116 aa)
	GQ55_3G372100	zf-C3Hc3H domain-containing protein. (301 aa)
	GQ55_3G382500	SGF29 C-terminal domain-containing protein. (281 aa)
	GQ55_2G064700	Uncharacterized protein. (241 aa)
	GQ55_2G229700	Histone acetyltransferase type B catalytic subunit. (465 aa)
	GQ55_2G263300	Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. (157 aa)
	GQ55_2G281600	RuvB-like helicase; Belongs to the RuvB family. (475 aa)
	GQ55_2G285500	Uncharacterized protein. (190 aa)
	GQ55_2G302500	SANT domain-containing protein. (593 aa)
	GQ55_2G399400	Bromo domain-containing protein. (593 aa)
	GQ55_2G412800	RuvB-like helicase; Belongs to the RuvB family. (478 aa)
	GQ55_2G431200	Uncharacterized protein. (190 aa)
	GQ55_2G441900	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (443 aa)
	GQ55_2G485700	PHD-type domain-containing protein. (710 aa)
	GQ55_1G030200	Uncharacterized protein. (308 aa)
	GQ55_1G030300	Uncharacterized protein. (1720 aa)
	GQ55_1G067600	Uncharacterized protein. (2140 aa)
	GQ55_1G127400	MRG domain-containing protein. (323 aa)
	GQ55_1G157500	Uncharacterized protein. (474 aa)
	GQ55_1G349300	N-acetyltransferase domain-containing protein. (254 aa)
	GQ55_1G406800	N-acetyltransferase domain-containing protein. (262 aa)

Your Current Organism:

Panicum hallii

NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GQ55_1G030200	GQ55_5G100400	A0A2T7F1M8	A0A2T7DER2	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.410
GQ55_1G030300	GQ55_2G285500	A0A2T7F1N4	A0A2T7ETB5	Uncharacterized protein.	Uncharacterized protein.	0.438
GQ55_1G030300	GQ55_2G441900	A0A2T7F1N4	A0A2T7EYX2	Uncharacterized protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.739
GQ55_1G030300	GQ55_4G237600	A0A2T7F1N4	A0A2T7DZM0	Uncharacterized protein.	Uncharacterized protein.	0.438
GQ55_1G030300	GQ55_4G324600	A0A2T7F1N4	A0A2T7E2E6	Uncharacterized protein.	Uncharacterized protein.	0.438
GQ55_1G030300	GQ55_5G100400	A0A2T7F1N4	A0A2T7DER2	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.651
GQ55_1G030300	GQ55_5G186200	A0A2T7F1N4	A0A2T7DHQ1	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.438
GQ55_1G067600	GQ55_3G187400	A0A2T7F305	A0A2T7EB13	Uncharacterized protein.	SANT domain-containing protein.	0.630
GQ55_1G067600	GQ55_5G100400	A0A2T7F305	A0A2T7DER2	Uncharacterized protein.	RuvB-like helicase; Belongs to the RuvB family.	0.488
GQ55_1G127400	GQ55_2G064700	A0A2T7F4Y6	A0A2T7EM37	MRG domain-containing protein.	Uncharacterized protein.	0.872
GQ55_1G127400	GQ55_2G281600	A0A2T7F4Y6	A0A2T7ET69	MRG domain-containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.936
GQ55_1G127400	GQ55_2G285500	A0A2T7F4Y6	A0A2T7ETB5	MRG domain-containing protein.	Uncharacterized protein.	0.958
GQ55_1G127400	GQ55_2G412800	A0A2T7F4Y6	A0A2T7EXU9	MRG domain-containing protein.	RuvB-like helicase; Belongs to the RuvB family.	0.936
GQ55_1G127400	GQ55_2G441900	A0A2T7F4Y6	A0A2T7EYX2	MRG domain-containing protein.	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.	0.992
GQ55_1G127400	GQ55_3G074700	A0A2T7F4Y6	A0A2T7E6S0	MRG domain-containing protein.	AB hydrolase-1 domain-containing protein.	0.441
GQ55_1G127400	GQ55_3G146000	A0A2T7F4Y6	A0A2T7E9G1	MRG domain-containing protein.	Uncharacterized protein.	0.555
GQ55_1G127400	GQ55_3G187400	A0A2T7F4Y6	A0A2T7EB13	MRG domain-containing protein.	SANT domain-containing protein.	0.979
GQ55_1G127400	GQ55_4G237600	A0A2T7F4Y6	A0A2T7DZM0	MRG domain-containing protein.	Uncharacterized protein.	0.958
GQ55_1G127400	GQ55_4G324600	A0A2T7F4Y6	A0A2T7E2E6	MRG domain-containing protein.	Uncharacterized protein.	0.958
GQ55_1G127400	GQ55_4G346100	A0A2T7F4Y6	A0A2T7E390	MRG domain-containing protein.	Uncharacterized protein.	0.872