11 items (Panicum hallii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GQ55_9G446900	Uncharacterized protein. (230 aa)
	GQ55_5G084400	TFIID_20kDa domain-containing protein. (508 aa)
	GQ55_5G093500	TFIID_20kDa domain-containing protein. (561 aa)
	GQ55_5G204900	TAFII28 domain-containing protein. (208 aa)
	GQ55_5G224500	TAFII55_N domain-containing protein. (199 aa)
	GQ55_5G296500	TAF domain-containing protein. (540 aa)
	GQ55_4G069700	Uncharacterized protein. (1806 aa)
	GQ55_3G446700	BTP domain-containing protein. (359 aa)
	GQ55_2G090400	TFIID_20kDa domain-containing protein. (496 aa)
	GQ55_2G431200	Uncharacterized protein. (190 aa)
	GQ55_1G353100	BTP domain-containing protein. (247 aa)

Your Current Organism:

Panicum hallii

NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GQ55_1G353100	GQ55_2G090400	A0A2T7FAW9	A0A2T7EMZ5	BTP domain-containing protein.	TFIID_20kDa domain-containing protein.	0.969
GQ55_1G353100	GQ55_2G431200	A0A2T7FAW9	A0A2T7EYH8	BTP domain-containing protein.	Uncharacterized protein.	0.947
GQ55_1G353100	GQ55_3G446700	A0A2T7FAW9	A0A2T7EIB3	BTP domain-containing protein.	BTP domain-containing protein.	0.938
GQ55_1G353100	GQ55_4G069700	A0A2T7FAW9	A0A2T7DW19	BTP domain-containing protein.	Uncharacterized protein.	0.992
GQ55_1G353100	GQ55_5G084400	A0A2T7FAW9	A0A2T7DE93	BTP domain-containing protein.	TFIID_20kDa domain-containing protein.	0.969
GQ55_1G353100	GQ55_5G093500	A0A2T7FAW9	A0A2T7DEI0	BTP domain-containing protein.	TFIID_20kDa domain-containing protein.	0.969
GQ55_1G353100	GQ55_5G204900	A0A2T7FAW9	A0A2T7DIF2	BTP domain-containing protein.	TAFII28 domain-containing protein.	0.993
GQ55_1G353100	GQ55_5G224500	A0A2T7FAW9	A0A2T7DJ31	BTP domain-containing protein.	TAFII55_N domain-containing protein.	0.990
GQ55_1G353100	GQ55_5G296500	A0A2T7FAW9	A0A2T7DLF9	BTP domain-containing protein.	TAF domain-containing protein.	0.993
GQ55_1G353100	GQ55_9G446900	A0A2T7FAW9	A0A2T7CBL5	BTP domain-containing protein.	Uncharacterized protein.	0.947
GQ55_2G090400	GQ55_1G353100	A0A2T7EMZ5	A0A2T7FAW9	TFIID_20kDa domain-containing protein.	BTP domain-containing protein.	0.969
GQ55_2G090400	GQ55_2G431200	A0A2T7EMZ5	A0A2T7EYH8	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.967
GQ55_2G090400	GQ55_3G446700	A0A2T7EMZ5	A0A2T7EIB3	TFIID_20kDa domain-containing protein.	BTP domain-containing protein.	0.969
GQ55_2G090400	GQ55_4G069700	A0A2T7EMZ5	A0A2T7DW19	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.988
GQ55_2G090400	GQ55_5G093500	A0A2T7EMZ5	A0A2T7DEI0	TFIID_20kDa domain-containing protein.	TFIID_20kDa domain-containing protein.	0.948
GQ55_2G090400	GQ55_5G204900	A0A2T7EMZ5	A0A2T7DIF2	TFIID_20kDa domain-containing protein.	TAFII28 domain-containing protein.	0.988
GQ55_2G090400	GQ55_5G224500	A0A2T7EMZ5	A0A2T7DJ31	TFIID_20kDa domain-containing protein.	TAFII55_N domain-containing protein.	0.988
GQ55_2G090400	GQ55_5G296500	A0A2T7EMZ5	A0A2T7DLF9	TFIID_20kDa domain-containing protein.	TAF domain-containing protein.	0.988
GQ55_2G090400	GQ55_9G446900	A0A2T7EMZ5	A0A2T7CBL5	TFIID_20kDa domain-containing protein.	Uncharacterized protein.	0.967
GQ55_2G431200	GQ55_1G353100	A0A2T7EYH8	A0A2T7FAW9	Uncharacterized protein.	BTP domain-containing protein.	0.947