STRINGSTRING
pdxB pdxB AJY51561.1 AJY51561.1 AJY52707.1 AJY52707.1 AJY52708.1 AJY52708.1 AJY52709.1 AJY52709.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pdxBErythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. (385 aa)
AJY51561.1KEGG: hypothetical protein. (93 aa)
AJY52707.1KEGG: LrgA protein; PFAM: LrgA family protein. (117 aa)
AJY52708.1PFAM: LrgB family protein; KEGG: LrgB family protein. (241 aa)
AJY52709.1PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein; SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; KEGG: gap; glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (345 aa)
Your Current Organism:
Halomonas sp. KO116
NCBI taxonomy Id: 1504981
Other names: H. sp. KO116
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