STRINGSTRING
AJY48628.1 AJY48628.1 AJY49446.1 AJY49446.1 AJY49571.1 AJY49571.1 AJY49572.1 AJY49572.1 rpoS rpoS AJY50200.1 AJY50200.1 AJY50236.1 AJY50236.1 AJY50251.1 AJY50251.1 AJY50419.1 AJY50419.1 AJY50518.1 AJY50518.1 AJY50519.1 AJY50519.1 AJY50558.1 AJY50558.1 AJY50698.1 AJY50698.1 AJY50700.1 AJY50700.1 AJY50701.1 AJY50701.1 AJY50766.1 AJY50766.1 AJY50767.1 AJY50767.1 AJY50768.1 AJY50768.1 AJY50983.1 AJY50983.1 AJY51267.1 AJY51267.1 rmf rmf AJY51569.1 AJY51569.1 AJY51744.1 AJY51744.1 AJY52320.1 AJY52320.1 AJY52431.1 AJY52431.1 AJY52432.1 AJY52432.1 AJY52433.1 AJY52433.1 AJY52584.1 AJY52584.1 AJY52703.1 AJY52703.1 AJY52714.1 AJY52714.1 AJY52716.1 AJY52716.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJY48628.1Rubredoxin--NAD(+) reductase; KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Belongs to the FAD-dependent oxidoreductase family. (411 aa)
AJY49446.1PFAM: regulator of RNA polymerase sigma(70) subunit Rsd/AlgQ; KEGG: anti-RNA polymerase sigma 70 factor; Belongs to the Rsd/AlgQ family. (162 aa)
AJY49571.1Putative protein family UPF0066; KEGG: hypothetical protein; TIGRFAM: Uncharacterized protein family UPF0066; PFAM: Uncharacterized protein family UPF0066. (245 aa)
AJY49572.1KEGG: N-acetyltransferase GCN5; PFAM: GCN5-related N-acetyltransferase. (174 aa)
rpoSRNA polymerase, sigma 38 subunit, RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response. (322 aa)
AJY50200.1Hypothetical protein; KEGG: enoyl-CoA hydratase. (197 aa)
AJY50236.1KEGG: hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase. (95 aa)
AJY50251.1KEGG: hypothetical protein. (189 aa)
AJY50419.1KEGG: hypothetical protein; PFAM: protein of unknown function DUF539. (84 aa)
AJY50518.1PFAM: tRNA-hydroxylase; KEGG: miaE; tRNA--hydroxylase. (232 aa)
AJY50519.1KEGG: adenylate/guanylate cyclase; SMART: transcriptional activator domain-containing protein. (1299 aa)
AJY50558.1KEGG: hypothetical protein; PFAM: Domain of unknown function DUF2489-containing protein. (155 aa)
AJY50698.1KEGG: hypothetical protein; PFAM: Protein of unknown function DUF2069, membrane. (129 aa)
AJY50700.1PFAM: AIG2 family protein; KEGG: hypothetical protein. (159 aa)
AJY50701.1Smr protein/MutS2; KEGG: ydaL; hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2. (196 aa)
AJY50766.1PFAM: [NiFe]-hydrogenase assembly, chaperone, HybE. (141 aa)
AJY50767.1Glutaredoxin, GrxA family; KEGG: grxA; glutaredoxin; PFAM: glutaredoxin; TIGRFAM: glutaredoxin, GrxA family. (87 aa)
AJY50768.1KEGG: hypothetical protein; PFAM: protein of unknown function DUF1338. (255 aa)
AJY50983.1PFAM: SEC-C motif domain protein; KEGG: hypothetical protein. (605 aa)
AJY51267.1PFAM: protein of unknown function DUF1249; KEGG: hypothetical protein. (148 aa)
rmfRibosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family. (69 aa)
AJY51569.1KEGG: hypothetical protein; PFAM: Hemerythrin HHE cation binding domain protein. (181 aa)
AJY51744.1Hypothetical protein; KEGG: OmpA-like transmembrane region. (201 aa)
AJY52320.1KEGG: hypothetical protein; PFAM: protein of unknown function DUF349. (938 aa)
AJY52431.1KEGG: hypothetical protein. (170 aa)
AJY52432.1KEGG: hypothetical protein; SMART: Sel1 domain protein repeat-containing protein. (164 aa)
AJY52433.1KEGG: aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain. (343 aa)
AJY52584.1PFAM: Domain of unknown function DUF4124; KEGG: hypothetical protein. (182 aa)
AJY52703.1PFAM: Auxin Efflux Carrier; KEGG: hypothetical protein. (311 aa)
AJY52714.1KEGG: yieH; hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3. (232 aa)
AJY52716.1KEGG: hypothetical protein; PFAM: NERD domain protein. (302 aa)
Your Current Organism:
Halomonas sp. KO116
NCBI taxonomy Id: 1504981
Other names: H. sp. KO116
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