STRINGSTRING
AJY48787.1 AJY48787.1 AJY48788.1 AJY48788.1 AJY48789.1 AJY48789.1 AJY48790.1 AJY48790.1 AJY48791.1 AJY48791.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJY48787.1PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: teaB; TRAP transporter small transmembrane protein TeaB. (192 aa)
AJY48788.1TRAP dicarboxylate transporter, DctM subunit; KEGG: teaC; TRAP transporter large transmembrane protein TeaC; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. (427 aa)
AJY48789.1KEGG: teaD; regulatory protein TeaD; PFAM: UspA domain-containing protein. (147 aa)
AJY48790.1PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; KEGG: FKBP-type peptidylprolyl isomerase. (226 aa)
AJY48791.1Hypothetical protein; KEGG: poly (3-hydroxybutyrate) depolymerase. (369 aa)
Your Current Organism:
Halomonas sp. KO116
NCBI taxonomy Id: 1504981
Other names: H. sp. KO116
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