STRINGSTRING
AJY50266.1 AJY50266.1 AJY50116.1 AJY50116.1 AJY50070.1 AJY50070.1 AJY49993.1 AJY49993.1 AJY49992.1 AJY49992.1 argD argD AJY49619.1 AJY49619.1 AJY49700.1 AJY49700.1 hisC hisC AJY49302.1 AJY49302.1 AJY49209.1 AJY49209.1 AJY49184.1 AJY49184.1 AJY49156.1 AJY49156.1 AJY49130.1 AJY49130.1 phnW phnW glyA-3 glyA-3 AJY48972.1 AJY48972.1 glyA-2 glyA-2 glyA glyA hemL hemL AJY52424.1 AJY52424.1 AJY52263.1 AJY52263.1 AJY52181.1 AJY52181.1 bioF bioF AJY52149.1 AJY52149.1 AJY52107.1 AJY52107.1 AJY52072.1 AJY52072.1 AJY52006.1 AJY52006.1 AJY51850.1 AJY51850.1 AJY51831.1 AJY51831.1 AJY51783.1 AJY51783.1 AJY51558.1 AJY51558.1 glyA-4 glyA-4 AJY51383.1 AJY51383.1 serC serC gcvP gcvP AJY50717.1 AJY50717.1 AJY50476.1 AJY50476.1 metZ metZ AJY50332.1 AJY50332.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJY50266.1TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; KEGG: sufS; cysteine desulfurase SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. (421 aa)
AJY50116.1Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde. (348 aa)
AJY50070.1Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: aminotransferase. (262 aa)
AJY49993.1Putative transcriptional regulator, GntR family; KEGG: transcriptional regulator; PFAM: aminotransferase class I and II; overlaps another CDS with the same product name. (226 aa)
AJY49992.1Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: pdxR; transcriptional regulatory protein PtsJ; overlaps another CDS with the same product name. (143 aa)
argDAcetylornithine/succinyldiaminopimelate aminotransferase; KEGG: argD; bifunctionalN-succinyldiaminopimelate-aminotransf erase/acetylornithine transaminase protein; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; HAMAP : Acetylornithine/succinyldiaminopimelate aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (404 aa)
AJY49619.1PFAM: aminotransferase class V; KEGG: sgaA; Serine--glyoxylate aminotransferase. (403 aa)
AJY49700.1Acetylornithine transaminase; KEGG: hypothetical protein; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (477 aa)
hisCTIGRFAM: histidinol-phosphate aminotransferase; HAMAP : Histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: hisC; histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (353 aa)
AJY49302.1Transcriptional regulator, GntR family with aminotransferase domain; SMART: regulatory protein GntR HTH; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator. (460 aa)
AJY49209.1SMART: regulatory protein GntR HTH; KEGG: yjiR; GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH. (482 aa)
AJY49184.1Beta-alanine--pyruvate transaminase; PFAM: aminotransferase class-III; KEGG: beta alanine--pyruvate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (457 aa)
AJY49156.1KEGG: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (423 aa)
AJY49130.1Acetylornithine transaminase; PFAM: aminotransferase class-III; KEGG: hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (449 aa)
phnW2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily. (386 aa)
glyA-3Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (437 aa)
AJY48972.1KEGG: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein. (81 aa)
glyA-2Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (439 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (437 aa)
hemLKEGG: hemL; glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; HAMAP : Glutamate-1-semialdehyde 2,1-aminomutase; PFAM: aminotransferase class-III. (426 aa)
AJY52424.1Cystathionine beta-lyase; PFAM: aminotransferase class I and II; KEGG: malY; aminotransferase. (388 aa)
AJY52263.1TIGRFAM: succinyldiaminopimelate transaminase; KEGG: dapC; succinyldiaminopimelate transaminase; PFAM: aminotransferase class I and II. (398 aa)
AJY52181.1TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (423 aa)
bioF8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. (385 aa)
AJY52149.1KEGG: iscS; cysteine desulfurase IscS; PFAM: aminotransferase class V. (388 aa)
AJY52107.1Histidinol-phosphate transaminase; PFAM: aminotransferase class I and II; KEGG: hisC; histidinol-phosphate aminotransferase. (374 aa)
AJY52072.1PFAM: aminotransferase class-III; KEGG: gabT; 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (425 aa)
AJY52006.1Acetylornithine transaminase; KEGG: putative class III aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (441 aa)
AJY51850.1Threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: L-allo-threonine aldolase. (335 aa)
AJY51831.1SMART: regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator; PFAM: aminotransferase class I and II; regulatory protein GntR HTH. (462 aa)
AJY51783.1PFAM: aminotransferase class V; KEGG: serine-pyruvate aminotransferase. (374 aa)
AJY51558.1Aspartate transaminase; KEGG: aminotransferase AlaT; PFAM: aminotransferase class I and II. (415 aa)
glyA-4Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (421 aa)
AJY51383.18-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; KEGG: wcbT; 8-amino-7-oxononanoate synthase. (441 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (367 aa)
gcvPGlycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (964 aa)
AJY50717.1Diaminobutyrate/2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (422 aa)
AJY50476.1Aromatic-amino-acid transaminase; PFAM: aminotransferase class I and II; KEGG: phhC; aromatic amino acid aminotransferase. (396 aa)
metZO-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (404 aa)
AJY50332.1KEGG: cobD; threonine-phosphate decarboxylase; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II. (367 aa)
Your Current Organism:
Halomonas sp. KO116
NCBI taxonomy Id: 1504981
Other names: H. sp. KO116
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