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AJY48928.1 AJY48928.1 AJY49222.1 AJY49222.1 AJY49041.1 AJY49041.1 AJY48949.1 AJY48949.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJY48928.1TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: soxA; sarcosine oxidase subunit alpha; Belongs to the GcvT family. (1016 aa)
AJY49222.1Dihydropyrimidine dehydrogenase (NADP(+)); KEGG: pyridine nucleotide-disulfide oxidoreductase family protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; FAD-dependent pyridine nucleotide-disulfide oxidoreductase. (459 aa)
AJY49041.1KEGG: soxA; sarcosine oxidase subunit alpha; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; TIGRFAM: sarcosine oxidase, alpha subunit family; Belongs to the GcvT family. (1020 aa)
AJY48949.1KEGG: soxA; sarcosine oxidase subunit alpha; TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; Glycine cleavage T-protein barrel; Belongs to the GcvT family. (1016 aa)
Your Current Organism:
Halomonas sp. KO116
NCBI taxonomy Id: 1504981
Other names: H. sp. KO116
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