STRINGSTRING
AYJ54_04205 AYJ54_04205 AYJ54_04210 AYJ54_04210 AYJ54_20425 AYJ54_20425 AYJ54_20440 AYJ54_20440 AYJ54_20450 AYJ54_20450 AYJ54_20455 AYJ54_20455
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AYJ54_04205NUDIX hydrolase; Belongs to the Nudix hydrolase family. (163 aa)
AYJ54_04210Metallophosphatase. (294 aa)
AYJ54_20425Uncharacterized protein. (72 aa)
AYJ54_20440Alpha/beta hydrolase. (251 aa)
AYJ54_20450zf-CHCC domain-containing protein. (81 aa)
AYJ54_20455Monooxygenase. (400 aa)
Your Current Organism:
Bradyrhizobium centrolobii
NCBI taxonomy Id: 1505087
Other names: B. centrolobii, Bradyrhizobium sp. BR 10245, Bradyrhizobium sp. BR 10290, Bradyrhizobium sp. BR 10351, HAMBI:3597, strain BR 10245
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