Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| JMA_12960 | deoB | JMA_12960 | JMA_20380 | Phosphoglucomutase. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.917 |
| JMA_19830 | JMA_25520 | JMA_19830 | JMA_25520 | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | Isochorismate synthase. | 0.800 |
| JMA_20740 | JMA_20750 | JMA_20740 | JMA_20750 | methylmalonyl-CoA mutase. | Hypothetical protein. | 0.995 |
| JMA_20740 | icmF | JMA_20740 | JMA_30540 | methylmalonyl-CoA mutase. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.998 |
| JMA_20750 | JMA_20740 | JMA_20750 | JMA_20740 | Hypothetical protein. | methylmalonyl-CoA mutase. | 0.995 |
| JMA_20750 | icmF | JMA_20750 | JMA_30540 | Hypothetical protein. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.927 |
| JMA_25210 | truB | JMA_25210 | JMA_17260 | RNA pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.406 |
| JMA_25520 | JMA_19830 | JMA_25520 | JMA_19830 | Isochorismate synthase. | Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis. | 0.800 |
| deoB | JMA_12960 | JMA_20380 | JMA_12960 | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | Phosphoglucomutase. | 0.917 |
| hemL | hemL-2 | JMA_12660 | JMA_23580 | Glutamate-1-semialdehyde aminotransferase. | Glutamate-1-semialdehyde aminotransferase. | 0.904 |
| hemL-2 | hemL | JMA_23580 | JMA_12660 | Glutamate-1-semialdehyde aminotransferase. | Glutamate-1-semialdehyde aminotransferase. | 0.904 |
| icmF | JMA_20740 | JMA_30540 | JMA_20740 | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | methylmalonyl-CoA mutase. | 0.998 |
| icmF | JMA_20750 | JMA_30540 | JMA_20750 | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | Hypothetical protein. | 0.927 |
| truA | truB | JMA_01670 | JMA_17260 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.597 |
| truA-2 | truB | JMA_11550 | JMA_17260 | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.610 |
| truB | JMA_25210 | JMA_17260 | JMA_25210 | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | RNA pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. | 0.406 |
| truB | truA | JMA_17260 | JMA_01670 | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.597 |
| truB | truA-2 | JMA_17260 | JMA_11550 | Hypothetical protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.610 |