STRINGSTRING
JMA_07140 JMA_07140 JMA_07150 JMA_07150 JMA_07220 JMA_07220 JMA_14740 JMA_14740 hisC hisC JMA_24670 JMA_24670 rocD rocD JMA_25740 JMA_25740 glyA glyA JMA_30700 JMA_30700 JMA_30770 JMA_30770 argD argD JMA_33930 JMA_33930
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
JMA_07140Cystathionine gamma-synthase. (371 aa)
JMA_07150Cystathionine beta-lyase. (389 aa)
JMA_07220Hypothetical protein. (433 aa)
JMA_14740Diaminopimelate aminotransferase. (391 aa)
hisCHistidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (362 aa)
JMA_24670Methionine gamma-lyase. (405 aa)
rocDOrnithine-oxoacid aminotransferase; Catalyzes the interconversion of ornithine to glutamate semialdehyde. (396 aa)
JMA_25740Hypothetical protein. (384 aa)
glyAPyridoxal-phosphate-dependent serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (411 aa)
JMA_30700Histidinol-phosphate transaminase. (357 aa)
JMA_30770Cystathionine beta-lyase. (379 aa)
argDAcetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (384 aa)
JMA_33930Pyridoxal phosphate-dependent aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (386 aa)
Your Current Organism:
Jeotgalibacillus malaysiensis
NCBI taxonomy Id: 1508404
Other names: DSM 28777, J. malaysiensis, Jeotgalibacillus malaysiensis Yaakop et al. 2015, Jeotgalibacillus sp. D5, KCTC 33550, strain D5
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