(11 nodes) CDK-mediated phosphorylation and removal of Cdc6, and Polo-like kinase mediated events network (Aspergillus nomius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANOM_010352	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (167 aa)
	ANOM_011071	Protein kinase. (1050 aa)
	ANOM_010558	G1/S-specific cyclin Cln1; Belongs to the cyclin family. (418 aa)
	ANOM_006420	Putative serine/threonine protein kinase. (1127 aa)
	ANOM_005579	Putative CDK; Belongs to the protein kinase superfamily. (316 aa)
	ANOM_005407	WD domain protein. (879 aa)
	ANOM_005078	Cell division control protein 2; Belongs to the protein kinase superfamily. (320 aa)
	ANOM_004684	Negative regulator of the PHO system; Belongs to the protein kinase superfamily. (303 aa)
	ANOM_003271	G2/mitotic-specific cyclin; Belongs to the cyclin family. (645 aa)
	ANOM_002182	G2/mitotic-specific cyclin-B; Belongs to the cyclin family. (498 aa)
	ANOM_002363	Putative cell division protein kinase (Ctk1). (393 aa)

Your Current Organism:

Aspergillus nomius

NCBI taxonomy Id: 1509407
Other names: A. nomius NRRL 13137, Aspergillus nomius NRRL 13137, Aspergillus nomius NRRL13137

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANOM_002182	ANOM_002363	A0A0L1JB35	A0A0L1JD63	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	Putative cell division protein kinase (Ctk1).	0.934
ANOM_002182	ANOM_004684	A0A0L1JB35	A0A0L1J5U2	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	Negative regulator of the PHO system; Belongs to the protein kinase superfamily.	0.946
ANOM_002182	ANOM_005078	A0A0L1JB35	A0A0L1J3K2	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	Cell division control protein 2; Belongs to the protein kinase superfamily.	0.991
ANOM_002182	ANOM_005407	A0A0L1JB35	A0A0L1J3G0	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	WD domain protein.	0.960
ANOM_002182	ANOM_005579	A0A0L1JB35	A0A0L1J2J6	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	Putative CDK; Belongs to the protein kinase superfamily.	0.981
ANOM_002182	ANOM_006420	A0A0L1JB35	A0A0L1IZW0	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	Putative serine/threonine protein kinase.	0.979
ANOM_002182	ANOM_010352	A0A0L1JB35	A0A0L1ILY9	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.965
ANOM_002182	ANOM_011071	A0A0L1JB35	A0A0L1IR55	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	Protein kinase.	0.993
ANOM_002363	ANOM_002182	A0A0L1JD63	A0A0L1JB35	Putative cell division protein kinase (Ctk1).	G2/mitotic-specific cyclin-B; Belongs to the cyclin family.	0.934
ANOM_002363	ANOM_003271	A0A0L1JD63	A0A0L1JB05	Putative cell division protein kinase (Ctk1).	G2/mitotic-specific cyclin; Belongs to the cyclin family.	0.934
ANOM_002363	ANOM_004684	A0A0L1JD63	A0A0L1J5U2	Putative cell division protein kinase (Ctk1).	Negative regulator of the PHO system; Belongs to the protein kinase superfamily.	0.837
ANOM_002363	ANOM_005078	A0A0L1JD63	A0A0L1J3K2	Putative cell division protein kinase (Ctk1).	Cell division control protein 2; Belongs to the protein kinase superfamily.	0.838
ANOM_002363	ANOM_005407	A0A0L1JD63	A0A0L1J3G0	Putative cell division protein kinase (Ctk1).	WD domain protein.	0.897
ANOM_002363	ANOM_005579	A0A0L1JD63	A0A0L1J2J6	Putative cell division protein kinase (Ctk1).	Putative CDK; Belongs to the protein kinase superfamily.	0.841
ANOM_002363	ANOM_006420	A0A0L1JD63	A0A0L1IZW0	Putative cell division protein kinase (Ctk1).	Putative serine/threonine protein kinase.	0.917
ANOM_002363	ANOM_010352	A0A0L1JD63	A0A0L1ILY9	Putative cell division protein kinase (Ctk1).	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.	0.956
ANOM_002363	ANOM_010558	A0A0L1JD63	A0A0L1IVL5	Putative cell division protein kinase (Ctk1).	G1/S-specific cyclin Cln1; Belongs to the cyclin family.	0.907
ANOM_002363	ANOM_011071	A0A0L1JD63	A0A0L1IR55	Putative cell division protein kinase (Ctk1).	Protein kinase.	0.944
ANOM_003271	ANOM_002363	A0A0L1JB05	A0A0L1JD63	G2/mitotic-specific cyclin; Belongs to the cyclin family.	Putative cell division protein kinase (Ctk1).	0.934
ANOM_003271	ANOM_004684	A0A0L1JB05	A0A0L1J5U2	G2/mitotic-specific cyclin; Belongs to the cyclin family.	Negative regulator of the PHO system; Belongs to the protein kinase superfamily.	0.941