(15 nodes) GTP binding domain network (Aspergillus nomius)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ANOM_011821	GTP-dependent nucleic acid-binding protein engD. (367 aa)
	ANOM_011869	G domain-containing protein. (426 aa)
	ANOM_011053	GTP-binding protein RBG1. (364 aa)
	ANOM_009992	G domain-containing protein. (414 aa)
	ANOM_007875	GTP-binding protein RBG1. (367 aa)
	ANOM_007672	G domain-containing protein. (395 aa)
	ANOM_006275	GTP-binding protein (EngB). (318 aa)
	ANOM_007037	GTP-binding protein Obg. (550 aa)
	ANOM_005309	Putative mitochondrial GTPase (Mss1). (609 aa)
	ANOM_006024	GTP-binding protein. (533 aa)
	ANOM_005510	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (559 aa)
	ANOM_005019	Nucleolar GTP-binding protein 1. (658 aa)
	ANOM_004447	Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. (337 aa)
	ANOM_002370	OBG-type G domain-containing protein. (415 aa)
	ANOM_000662	Putative ribosome biogenesis GTPase Lsg1. (638 aa)

Your Current Organism:

Aspergillus nomius

NCBI taxonomy Id: 1509407
Other names: A. nomius NRRL 13137, Aspergillus nomius NRRL 13137, Aspergillus nomius NRRL13137

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANOM_000662	ANOM_004447	A0A0L1JHZ5	A0A0L1J7G3	Putative ribosome biogenesis GTPase Lsg1.	Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.560
ANOM_000662	ANOM_005019	A0A0L1JHZ5	A0A0L1J5B4	Putative ribosome biogenesis GTPase Lsg1.	Nucleolar GTP-binding protein 1.	0.983
ANOM_000662	ANOM_005309	A0A0L1JHZ5	A0A0L1J260	Putative ribosome biogenesis GTPase Lsg1.	Putative mitochondrial GTPase (Mss1).	0.803
ANOM_000662	ANOM_005510	A0A0L1JHZ5	A0A0L1J423	Putative ribosome biogenesis GTPase Lsg1.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.893
ANOM_000662	ANOM_006024	A0A0L1JHZ5	A0A0L1J2L4	Putative ribosome biogenesis GTPase Lsg1.	GTP-binding protein.	0.939
ANOM_000662	ANOM_006275	A0A0L1JHZ5	A0A0L1IXY0	Putative ribosome biogenesis GTPase Lsg1.	GTP-binding protein (EngB).	0.829
ANOM_000662	ANOM_007037	A0A0L1JHZ5	A0A0L1J0G3	Putative ribosome biogenesis GTPase Lsg1.	GTP-binding protein Obg.	0.550
ANOM_002370	ANOM_005309	A0A0L1JD33	A0A0L1J260	OBG-type G domain-containing protein.	Putative mitochondrial GTPase (Mss1).	0.470
ANOM_002370	ANOM_006024	A0A0L1JD33	A0A0L1J2L4	OBG-type G domain-containing protein.	GTP-binding protein.	0.421
ANOM_002370	ANOM_007037	A0A0L1JD33	A0A0L1J0G3	OBG-type G domain-containing protein.	GTP-binding protein Obg.	0.459
ANOM_004447	ANOM_000662	A0A0L1J7G3	A0A0L1JHZ5	Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Putative ribosome biogenesis GTPase Lsg1.	0.560
ANOM_004447	ANOM_005019	A0A0L1J7G3	A0A0L1J5B4	Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Nucleolar GTP-binding protein 1.	0.951
ANOM_004447	ANOM_005309	A0A0L1J7G3	A0A0L1J260	Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Putative mitochondrial GTPase (Mss1).	0.940
ANOM_004447	ANOM_005510	A0A0L1J7G3	A0A0L1J423	Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.434
ANOM_004447	ANOM_006275	A0A0L1J7G3	A0A0L1IXY0	Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	GTP-binding protein (EngB).	0.955
ANOM_004447	ANOM_007037	A0A0L1J7G3	A0A0L1J0G3	Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	GTP-binding protein Obg.	0.831
ANOM_005019	ANOM_000662	A0A0L1J5B4	A0A0L1JHZ5	Nucleolar GTP-binding protein 1.	Putative ribosome biogenesis GTPase Lsg1.	0.983
ANOM_005019	ANOM_004447	A0A0L1J5B4	A0A0L1J7G3	Nucleolar GTP-binding protein 1.	Mitochondrial GTPase 1; Mitochondrial GTPase involved in assembly of the large ribosomal subunit. Plays a role in expression of the mitochondrial translational machinery; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.951
ANOM_005019	ANOM_005510	A0A0L1J5B4	A0A0L1J423	Nucleolar GTP-binding protein 1.	Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.	0.997
ANOM_005019	ANOM_006024	A0A0L1J5B4	A0A0L1J2L4	Nucleolar GTP-binding protein 1.	GTP-binding protein.	0.997