(27 nodes) RNA Pol II CTD phosphorylation and interaction with CE network (Aspergillus nomius)

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Your Input:
	ANOM_010379	Putative DNA-directed RNA polymerase II subunit RPB11a. (166 aa)
	ANOM_010389	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1748 aa)
	ANOM_009310	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1793 aa)
	ANOM_009667	mRNA cap guanine-N7 methyltransferase. (520 aa)
	ANOM_009101	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (480 aa)
	ANOM_008514	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	ANOM_007986	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (144 aa)
	ANOM_008469	mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family. (415 aa)
	ANOM_007516	DNA-directed RNA polymerase II subunit RPB3. (330 aa)
	ANOM_008622	RNA polymerase II transcription factor. (629 aa)
	ANOM_007454	DNA-directed RNA polymerases I, II, and III subunit RPABC2. (159 aa)
	ANOM_008854	Serine/threonine-protein kinase KIN28; Belongs to the protein kinase superfamily. (403 aa)
	ANOM_006988	Putative TFIIH complex helicase Rad3. (764 aa)
	ANOM_006059	Uncharacterized protein. (519 aa)
	ANOM_006058	DNA-directed RNA polymerase II subunit rpb7. (169 aa)
	ANOM_005512	RNA polymerase II transcription factor B subunit 3. (378 aa)
	ANOM_004353	Dual specificity phosphatase catalytic domain protein. (758 aa)
	ANOM_004880	RNA polymerase II transcription factor B subunit 5. (73 aa)
	ANOM_006384	Putative mRNA capping enzyme alpha subunit. (379 aa)
	ANOM_002503	DNA-directed RNA polymerases I, II, and III subunit RPABC1. (235 aa)
	ANOM_011121	General transcription and DNA repair factor IIH; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex, which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA and, when complexed to TFIIK, in RNA transcription by RNA polymerase II; Belongs to the GTF2H2 family. (457 aa)
	ANOM_002199	DNA-directed RNA polymerases I, II, and III subunit RPABC4. (73 aa)
	ANOM_002839	Transcription factor TFIIH complex subunit. (377 aa)
	ANOM_002003	Methyltransferase. (247 aa)
	ANOM_011082	Transcription elongation factor SPT5. (974 aa)
	ANOM_011486	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (714 aa)
	ANOM_002041	Putative TFIIH complex helicase Ssl2. (824 aa)

Your Current Organism:

Aspergillus nomius

NCBI taxonomy Id: 1509407
Other names: A. nomius NRRL 13137, Aspergillus nomius NRRL 13137, Aspergillus nomius NRRL13137

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANOM_002003	ANOM_002503	A0A0L1JDG9	A0A0L1J8Z9	Methyltransferase.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.659
ANOM_002003	ANOM_002839	A0A0L1JDG9	A0A0L1JDG3	Methyltransferase.	Transcription factor TFIIH complex subunit.	0.738
ANOM_002003	ANOM_004353	A0A0L1JDG9	A0A0L1J4E9	Methyltransferase.	Dual specificity phosphatase catalytic domain protein.	0.739
ANOM_002003	ANOM_006058	A0A0L1JDG9	A0A0L1J161	Methyltransferase.	DNA-directed RNA polymerase II subunit rpb7.	0.666
ANOM_002003	ANOM_006059	A0A0L1JDG9	A0A0L1J072	Methyltransferase.	Uncharacterized protein.	0.666
ANOM_002003	ANOM_006384	A0A0L1JDG9	A0A0L1J546	Methyltransferase.	Putative mRNA capping enzyme alpha subunit.	0.739
ANOM_002003	ANOM_007516	A0A0L1JDG9	A0A0L1IX12	Methyltransferase.	DNA-directed RNA polymerase II subunit RPB3.	0.727
ANOM_002003	ANOM_007986	A0A0L1JDG9	A0A0L1IUG9	Methyltransferase.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.668
ANOM_002003	ANOM_008469	A0A0L1JDG9	A0A0L1IVE5	Methyltransferase.	mRNA-capping enzyme subunit alpha; Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate; Belongs to the eukaryotic GTase family.	0.739
ANOM_002003	ANOM_008854	A0A0L1JDG9	A0A0L1IX45	Methyltransferase.	Serine/threonine-protein kinase KIN28; Belongs to the protein kinase superfamily.	0.712
ANOM_002003	ANOM_009310	A0A0L1JDG9	A0A0L1IRF5	Methyltransferase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.765
ANOM_002003	ANOM_010389	A0A0L1JDG9	A0A0L1IPP2	Methyltransferase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.499
ANOM_002003	ANOM_011082	A0A0L1JDG9	A0A0L1IM76	Methyltransferase.	Transcription elongation factor SPT5.	0.833
ANOM_002003	ANOM_011486	A0A0L1JDG9	A0A0L1IMQ2	Methyltransferase.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.651
ANOM_002041	ANOM_002199	A0A0L1JET5	A0A0L1JB36	Putative TFIIH complex helicase Ssl2.	DNA-directed RNA polymerases I, II, and III subunit RPABC4.	0.979
ANOM_002041	ANOM_002503	A0A0L1JET5	A0A0L1J8Z9	Putative TFIIH complex helicase Ssl2.	DNA-directed RNA polymerases I, II, and III subunit RPABC1.	0.986
ANOM_002041	ANOM_002839	A0A0L1JET5	A0A0L1JDG3	Putative TFIIH complex helicase Ssl2.	Transcription factor TFIIH complex subunit.	0.999
ANOM_002041	ANOM_004880	A0A0L1JET5	A0A0L1J4F2	Putative TFIIH complex helicase Ssl2.	RNA polymerase II transcription factor B subunit 5.	0.998
ANOM_002041	ANOM_005512	A0A0L1JET5	A0A0L1J302	Putative TFIIH complex helicase Ssl2.	RNA polymerase II transcription factor B subunit 3.	0.997
ANOM_002041	ANOM_006058	A0A0L1JET5	A0A0L1J161	Putative TFIIH complex helicase Ssl2.	DNA-directed RNA polymerase II subunit rpb7.	0.976