STRINGSTRING
amyA amyA CBH20304.1 CBH20304.1 CBH20366.1 CBH20366.1 CBH20367.1 CBH20367.1 CBH20368.1 CBH20368.1 CBH20369.1 CBH20369.1 CBH20370.1 CBH20370.1 CBH20371.1 CBH20371.1 ypfE ypfE eutP eutP CBH20374.1 CBH20374.1 CBH20375.1 CBH20375.1 eutA eutA eutB eutB eutC eutC eutL eutL CBH20380.1 CBH20380.1 cchA cchA eutT eutT CBH20384.1 CBH20384.1 CBH20385.1 CBH20385.1 eutH eutH CBH20387.1 CBH20387.1 eutJ eutJ cchB cchB CBH20390.1 CBH20390.1 CBH20391.1 CBH20391.1 CBH20513.1 CBH20513.1 CBH20515.1 CBH20515.1 CBH20516.1 CBH20516.1 mtnK mtnK fucA fucA CBH20519.1 CBH20519.1 CBH20520.1 CBH20520.1 CBH20641.1 CBH20641.1 CBH20642.1 CBH20642.1 ydgJ ydgJ CBH20664.1 CBH20664.1 CBH20665.1 CBH20665.1 CBH20666.1 CBH20666.1 xylF xylF CBH20668.1 CBH20668.1 xylG xylG xylH xylH CBH20729.1 CBH20729.1 CBH20784.1 CBH20784.1 CBH20797.1 CBH20797.1 CBH20798.1 CBH20798.1 CBH20799.1 CBH20799.1 eutE eutE CBH20801.1 CBH20801.1 cchA-2 cchA-2 CBH20803.1 CBH20803.1 cchA-3 cchA-3 CBH20805.1 CBH20805.1 cchB-2 cchB-2 CBH20807.1 CBH20807.1 CBH20808.1 CBH20808.1 CBH20809.1 CBH20809.1 CBH20810.1 CBH20810.1 CBH20811.1 CBH20811.1 rbsA rbsA CBH20813.1 CBH20813.1 mtrK mtrK mtnA mtnA CBH20869.1 CBH20869.1 FNV FNV CBH20871.1 CBH20871.1 sbcD sbcD CBH20873.1 CBH20873.1 CBH20874.1 CBH20874.1 CBH20896.1 CBH20896.1 rbsA-2 rbsA-2 rbsC rbsC CBH20899.1 CBH20899.1 ydjJ ydjJ xylB xylB ald ald CBH21089.1 CBH21089.1 glgC glgC glgD glgD glgA glgA glgP glgP CBH21094.1 CBH21094.1 CBH21125.1 CBH21125.1 CBH21126.1 CBH21126.1 CBH21127.1 CBH21127.1 CBH21128.1 CBH21128.1 CBH21129.1 CBH21129.1 CBH21131.1 CBH21131.1 CBH21132.1 CBH21132.1 CBH21133.1 CBH21133.1 GLC GLC cstA cstA CBH21198.1 CBH21198.1 ypdB ypdB ypdA ypdA CBH21202.1 CBH21202.1 CBH21203.1 CBH21203.1 CBH21330.1 CBH21330.1 CBH21331.1 CBH21331.1 amyC amyC CBH21334.1 CBH21334.1 malQ malQ ycjV ycjV malP malP CBH21338.1 CBH21338.1 yhdG yhdG CBH22059.1 CBH22059.1 CBH22084.1 CBH22084.1 CBH22173.1 CBH22173.1 livF livF livG livG CBH22322.1 CBH22322.1 livH livH CBH22324.1 CBH22324.1 CBH22325.1 CBH22325.1 rbsB rbsB rbsC-2 rbsC-2 rbsA-3 rbsA-3 rbsD rbsD rbsK rbsK rbsR rbsR CBH22539.1 CBH22539.1
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
amyACytoplasmic alpha-amylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (483 aa)
CBH20304.1Putative Alpha-amylase precursor (1, 4-alpha-D-glucan glucanohydrolase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (499 aa)
CBH20366.1Exported protein of unknown function; No homology to any previously reported sequences. (99 aa)
CBH20367.1Putative permease (Major facilitator superfamily); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (405 aa)
CBH20368.1Membrane protein of unknown function; No homology to any previously reported sequences. (112 aa)
CBH20369.1Exported protein of unknown function; No homology to any previously reported sequences. (444 aa)
CBH20370.1DNA-binding response regulator. (228 aa)
CBH20371.1Sensor histidine kinase. (474 aa)
ypfEPutative carboxysome-like ethanolaminosome structural protein with role in ethanol utilization; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (114 aa)
eutPEthanolamine utilization protein eutP; Belongs to the EutP/PduV family. (143 aa)
CBH20374.1Ethanolamine utilization response regulator. (200 aa)
CBH20375.1Signal transduction histidine kinase. (472 aa)
eutAReactivating factor for ethanolamine ammonia lyase; Function of homologous gene experimentally demonstrated in an other organism; factor. (481 aa)
eutBEthanolamine ammonia-lyase, large subunit, heavy chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (455 aa)
eutCEthanolamine ammonia-lyase light chain (Ethanolamine ammonia-lyase small subunit); Belongs to the EutC family. (294 aa)
eutLPutative carboxysome-related structural protein with role in ethanolamine utilization; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (217 aa)
CBH20380.1Homologs of previously reported genes of unknown function. (168 aa)
cchAPutative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (97 aa)
eutTPutative cobalamin adenosyltransferase in ethanolamine utilization; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (254 aa)
CBH20384.1Propanediol utilization protein (modular protein). (300 aa)
CBH20385.1Protein of unknown function; No homology to any previously reported sequences. (89 aa)
eutHPutative ethanolamine transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (375 aa)
CBH20387.1Ethanolamine utilization protein (Transcriptional regulator). (149 aa)
eutJPutative chaperonin, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (281 aa)
cchBPutative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (86 aa)
CBH20390.1Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit. (445 aa)
CBH20391.1Homologs of previously reported genes of unknown function. (176 aa)
CBH20513.1Protein of unknown function; No homology to any previously reported sequences. (441 aa)
CBH20515.1Protein of unknown function; No homology to any previously reported sequences. (436 aa)
CBH20516.1Putative translation initiation factor EIF-2B subunit 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the eIF-2B alpha/beta/delta subunits family. (350 aa)
mtnK5-methylribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate. (406 aa)
fucAL-fuculose phosphate aldolase. (212 aa)
CBH20519.1Membrane protein of unknown function; No homology to any previously reported sequences. (700 aa)
CBH20520.1Homologs of previously reported genes of unknown function. (285 aa)
CBH20641.1Membrane protein of unknown function; No homology to any previously reported sequences. (438 aa)
CBH20642.1Homologs of previously reported genes of unknown function. (244 aa)
ydgJPutative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (356 aa)
CBH20664.1Periplasmic binding protein/LacI transcriptional regulator. (321 aa)
CBH20665.1Histidine kinase internal region. (503 aa)
CBH20666.1Putative Response regulator receiver protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (515 aa)
xylFD-xylose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (358 aa)
CBH20668.1Ribose ABC transporter (ribose-binding protein). (363 aa)
xylGFused D-xylose transporter subunits of ABC superfamily: ATP-binding components; Function of homologous gene experimentally demonstrated in an other organism; transporter. (506 aa)
xylHD-xylose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. (391 aa)
CBH20729.1Putative ABC transporter-binding protein DR_1438 precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (435 aa)
CBH20784.1Homologs of previously reported genes of unknown function. (479 aa)
CBH20797.1Putative YqjE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (374 aa)
CBH20798.1Transcriptional regulator (DeoR family). (254 aa)
CBH20799.1Class II aldolase/adducin-like. (282 aa)
eutEPutative aldehyde dehydrogenase, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (503 aa)
CBH20801.1Homologs of previously reported genes of unknown function. (107 aa)
cchA-2Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (90 aa)
CBH20803.1Putative Microcompartments protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (108 aa)
cchA-3Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (90 aa)
CBH20805.1Conserved protein of unknown function; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (216 aa)
cchB-2Putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure. (85 aa)
CBH20807.1ABC-type sugar transport system periplasmic component-like protein. (389 aa)
CBH20808.1Pyridine nucleotide-disulfide oxidoreductase, class I. (443 aa)
CBH20809.1Putative Coenzyme A transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (278 aa)
CBH20810.1Putative glutaconate CoA-transferase, subunit B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (249 aa)
CBH20811.1Methylthioribose-binding protein. (364 aa)
rbsAFused D-ribose transporter subunits of ABC superfamily: ATP-binding components; Function of homologous gene experimentally demonstrated in an other organism; transporter. (504 aa)
CBH20813.1Methylthioribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (331 aa)
mtrK5-methylribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate. (401 aa)
mtnAPutative Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). (354 aa)
CBH20869.1Putative glutamine amidotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (242 aa)
FNVArginine permease. (474 aa)
CBH20871.1Putative sigma-54-dependent transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (668 aa)
sbcDExonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (407 aa)
CBH20873.1Putative Nuclease sbcCD subunit C; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (1168 aa)
CBH20874.1Uncharacterized oxidoreductase TM_0019. (234 aa)
CBH20896.1Ribose operon repressor. (332 aa)
rbsA-2Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components; Function of homologous gene experimentally demonstrated in an other organism; transporter. (496 aa)
rbsCD-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
CBH20899.1ABC-type sugar transport system periplasmic component-like protein precursor. (331 aa)
ydjJPutative iditol dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (346 aa)
xylBXylulokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (489 aa)
ald4, 4'-diapolycopene-dialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (488 aa)
CBH21089.1Protein of unknown function; No homology to any previously reported sequences. (77 aa)
glgCGlucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (400 aa)
glgDGlycogen biosynthesis protein GlgD. (373 aa)
glgAGlycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (478 aa)
glgPGlycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (810 aa)
CBH21094.1Putative alpha-amylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (627 aa)
CBH21125.1Protein of unknown function; No homology to any previously reported sequences. (309 aa)
CBH21126.1Inner-membrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family. (431 aa)
CBH21127.1Inner-membrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family. (347 aa)
CBH21128.1ABC transporter related. (533 aa)
CBH21129.1Homologs of previously reported genes of unknown function. (387 aa)
CBH21131.1Protein of unknown function; No homology to any previously reported sequences. (141 aa)
CBH21132.1Homologs of previously reported genes of unknown function. (202 aa)
CBH21133.1Putative Na(+)/H(+) antiporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (424 aa)
GLC1,4-alpha-glucan-branching enzyme (Glycogen-branching enzyme). (673 aa)
cstACarbon starvation protein A (Carbon starvation protein CstA). (546 aa)
CBH21198.1Homologs of previously reported genes of unknown function. (165 aa)
ypdBPutative response regulator in two-component system with YpdA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (233 aa)
ypdAPutative sensory kinase in two-component system with YpdB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (559 aa)
CBH21202.1Homologs of previously reported genes of unknown function. (215 aa)
CBH21203.1Sigma54 specific transcriptional regulator, Fis family. (465 aa)
CBH21330.1Extracellular solute-binding protein, family 1 precursor. (450 aa)
CBH21331.1Sugar transporter AmyD (fragment). (174 aa)
amyCMaltose transport protein AmyC. (278 aa)
CBH21334.1Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (338 aa)
malQ4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme). (498 aa)
ycjVPutative sugar transporter subunit: ATP-binding component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the ABC transporter superfamily. (371 aa)
malPMaltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (788 aa)
CBH21338.1Putative iron-sulfur protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (418 aa)
yhdGAmino acid/polyamine transporter I. (457 aa)
CBH22059.1Homologs of previously reported genes of unknown function. (182 aa)
CBH22084.1Short-chain dehydrogenase/reductase SDR YhxC (fragment). (121 aa)
CBH22173.1Sulfate transporter family protein. (500 aa)
livFLeucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (235 aa)
livGLeucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (256 aa)
CBH22322.1Inner-membrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family. (288 aa)
livHLeucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. (292 aa)
CBH22324.1Extracellular ligand-binding receptor precursor. (391 aa)
CBH22325.1Protein of unknown function; No homology to any previously reported sequences. (67 aa)
rbsBD-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter. (307 aa)
rbsC-2D-ribose transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family. (310 aa)
rbsA-3Fused D-ribose transporter subunits of ABC superfamily: ATP-binding components; Function of homologous gene experimentally demonstrated in an other organism; transporter. (495 aa)
rbsDPutative cytoplasmic sugar-binding protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (136 aa)
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (298 aa)
rbsRDNA-binding transcriptional repressor of ribose metabolism; Function of homologous gene experimentally demonstrated in an other organism; regulator. (335 aa)
CBH22539.1Homologs of previously reported genes of unknown function. (237 aa)
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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