STRINGSTRING
speB speB speE speE speH speH speA speA CBH20265.1 CBH20265.1 CBH20438.1 CBH20438.1 CBH20439.1 CBH20439.1 CBH20440.1 CBH20440.1 CBH20937.1 CBH20937.1 CBH20938.1 CBH20938.1 CBH20946.1 CBH20946.1 CBH20947.1 CBH20947.1 CBH20948.1 CBH20948.1 CBH20949.1 CBH20949.1 CBH21352.1 CBH21352.1 ynbB ynbB CBH21603.1 CBH21603.1 CBH21662.1 CBH21662.1 pfs pfs CBH22678.1 CBH22678.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
speBAgmatinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the arginase family. (283 aa)
speESpermidine synthase (putrescine aminopropyltransferase); Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (282 aa)
speHS-adenosylmethionine decarboxylase alpha chain; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (143 aa)
speAArginine decarboxylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (491 aa)
CBH20265.1GCN5-related N-acetyltransferase. (173 aa)
CBH20438.1Cytosine-specific methyltransferase. (344 aa)
CBH20439.1Homologs of previously reported genes of unknown function. (470 aa)
CBH20440.1Cytosine-specific methyltransferase. (326 aa)
CBH20937.1Modification methylase Sau3AI (Cytosine-specific methyltransferase Sau3AI) (M.Sau3AI) (fragment). (219 aa)
CBH20938.1Modification methylase Sau3AI (Cytosine-specific methyltransferase Sau3AI) (M.Sau3AI) (fragment). (49 aa)
CBH20946.1YCII-related. (98 aa)
CBH20947.1Homologs of previously reported genes of unknown function. (49 aa)
CBH20948.1Putative radical SAM family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (459 aa)
CBH20949.1Putative SpeA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (495 aa)
CBH21352.1Putative site-specific integrase/recombinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the 'phage' integrase family. (334 aa)
ynbBPutative C-S lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (427 aa)
CBH21603.1Putative membrane-bound metal-dependent hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (261 aa)
CBH21662.1C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (466 aa)
pfs5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. (230 aa)
CBH22678.1Putative GCN5-related N-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (197 aa)
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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