Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBH20909.1 | CBH20910.1 | CLOST_0783 | CLOST_0784 | Homologs of previously reported genes of unknown function. | Putative integral inner membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.741 |
| CBH20910.1 | CBH20909.1 | CLOST_0784 | CLOST_0783 | Putative integral inner membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Homologs of previously reported genes of unknown function. | 0.741 |
| CBH20974.1 | msrA | CLOST_0849 | CLOST_1083 | Glutaredoxin. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.869 |
| CBH21917.1 | msrA | CLOST_1797 | CLOST_1083 | Membrane protein. | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.801 |
| CBH21917.1 | msrB | CLOST_1797 | CLOST_2458 | Membrane protein. | Methionine sulfoxide reductase B; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.801 |
| CBH22216.1 | CBH22219.1 | CLOST_2096 | CLOST_2099 | Protein of unknown function; No homology to any previously reported sequences. | Homologs of previously reported genes of unknown function. | 0.564 |
| CBH22216.1 | CBH22222.1 | CLOST_2096 | CLOST_2102 | Protein of unknown function; No homology to any previously reported sequences. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.559 |
| CBH22219.1 | CBH22216.1 | CLOST_2099 | CLOST_2096 | Homologs of previously reported genes of unknown function. | Protein of unknown function; No homology to any previously reported sequences. | 0.564 |
| CBH22219.1 | CBH22222.1 | CLOST_2099 | CLOST_2102 | Homologs of previously reported genes of unknown function. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.770 |
| CBH22222.1 | CBH22216.1 | CLOST_2102 | CLOST_2096 | Exported protein of unknown function; No homology to any previously reported sequences. | Protein of unknown function; No homology to any previously reported sequences. | 0.559 |
| CBH22222.1 | CBH22219.1 | CLOST_2102 | CLOST_2099 | Exported protein of unknown function; No homology to any previously reported sequences. | Homologs of previously reported genes of unknown function. | 0.770 |
| CBH22393.1 | msrA | CLOST_2276 | CLOST_1083 | Glutaredoxin (fragment). | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.760 |
| CBH22523.1 | trxA | CLOST_2406 | CLOST_1109 | Putative peroxiredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Thioredoxin (Trx); Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. | 0.479 |
| acoL | trxA | CLOST_1166 | CLOST_1109 | Dihydrolipoamide dehydrogenase. | Thioredoxin (Trx); Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. | 0.495 |
| ahpC | trxA | CLOST_2030 | CLOST_1109 | Alkyl hydroperoxide reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Thioredoxin (Trx); Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions. | 0.479 |
| msrA | CBH20974.1 | CLOST_1083 | CLOST_0849 | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Glutaredoxin. | 0.869 |
| msrA | CBH21917.1 | CLOST_1083 | CLOST_1797 | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Membrane protein. | 0.801 |
| msrA | CBH22393.1 | CLOST_1083 | CLOST_2276 | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Glutaredoxin (fragment). | 0.760 |
| msrA | msrB | CLOST_1083 | CLOST_2458 | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Methionine sulfoxide reductase B; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.993 |
| msrB | CBH21917.1 | CLOST_2458 | CLOST_1797 | Methionine sulfoxide reductase B; Function of homologous gene experimentally demonstrated in an other organism; enzyme. | Membrane protein. | 0.801 |
page 1 of 2