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| | CBH21135.1 | Arsenical pump family protein. (424 aa) |
| | OmpR | Transcription response regulator-like protein. (230 aa) |
| | CBH21142.1 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (456 aa) |
| | mutX | 8-oxo-dGTP diphosphatase; Mutator mutT protein (7, 8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) (dGTP pyrophosphohydrolase). (153 aa) |
| | CBH21159.1 | ATPas. (341 aa) |
| | CBH21195.1 | DNA-binding response regulator. (233 aa) |
| | CBH21196.1 | Integral membrane sensor signal transduction histidine kinase (fragment). (703 aa) |
| | cstA | Carbon starvation protein A (Carbon starvation protein CstA). (546 aa) |
| | ypdB | Putative response regulator in two-component system with YpdA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (233 aa) |
| | CBH21384.1 | Restriction modification system DNA specificity domain. (405 aa) |
| | CBH21382.1 | Type III restriction protein res subunit. (1009 aa) |
| | lexA | LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (208 aa) |
| | mutL | DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (634 aa) |
| | mutS | DNA mismatch repair recognition factor; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (853 aa) |
| | CBH21346.1 | UspA. (131 aa) |
| | phr | Deoxyribodipyrimidine photo-lyase (DNA photolyase) (Photoreactivating enzyme). (447 aa) |
| | vorB-2 | Ketoisovalerate oxidoreductase subunit vorB (VOR) (2-oxoisovalerate oxidoreductase beta chain) (2-oxoisovalerate ferredoxin reductase subunit beta). (356 aa) |
| | mutS2 | Recombination and DNA strand exchange inhibitor protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (793 aa) |
| | CBH21258.1 | Putative Methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (676 aa) |
| | CBH20189.1 | Homologs of previously reported genes of unknown function. (221 aa) |
| | CBH20226.1 | Membrane associated methyl-accepting chemotaxis protein. (598 aa) |
| | CBH20229.1 | Exported protein of unknown function; No homology to any previously reported sequences. (540 aa) |
| | CBH20234.1 | Protein of unknown function; No homology to any previously reported sequences. (563 aa) |
| | CBH20239.1 | Conserved protein of unknown function; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (115 aa) |
| | recR | Gap repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (200 aa) |
| | CBH20243.1 | Nitroreductase family protein. (199 aa) |
| | CBH20245.1 | Putative Nitroimidazole resistance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (187 aa) |
| | CBH20253.1 | Protein of unknown function; No homology to any previously reported sequences. (844 aa) |
| | CBH20256.1 | Protein of unknown function; No homology to any previously reported sequences. (688 aa) |
| | CBH20260.1 | Putative Response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (526 aa) |
| | CBH20261.1 | Sensor protein (fragment). (97 aa) |
| | CBH20262.1 | Exported protein of unknown function; No homology to any previously reported sequences. (521 aa) |
| | CBH20272.1 | Homologs of previously reported genes of unknown function. (85 aa) |
| | CBH20276.1 | Exported protein of unknown function; No homology to any previously reported sequences. (548 aa) |
| | CBH20279.1 | PAP2 family protein. (170 aa) |
| | CBH20288.1 | Homologs of previously reported genes of unknown function. (167 aa) |
| | clpB | Protein disaggregation chaperone; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the ClpA/ClpB family. (821 aa) |
| | radA | Repair protein radA homolog; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (453 aa) |
| | clpB-2 | Protein disaggregation chaperone; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the ClpA/ClpB family. (753 aa) |
| | CBH20305.1 | Putative MutS family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (653 aa) |
| | trxB | Thioredoxin reductase. (314 aa) |
| | nth | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III); DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (209 aa) |
| | CBH21219.1 | Putative endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (134 aa) |
| | CBH21208.1 | Homologs of previously reported genes of unknown function. (235 aa) |
| | ung | uracil-DNA-glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (221 aa) |
| | msrA | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (191 aa) |
| | ypdA | Putative sensory kinase in two-component system with YpdB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor. (559 aa) |
| | cheW | Purine-binding chemotaxis protein; Function of homologous gene experimentally demonstrated in an other organism; regulator. (139 aa) |
| | cheB | Fused chemotaxis regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (357 aa) |
| | cheC | CheC chemotaxis protein. (207 aa) |
| | cheD | CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. (161 aa) |
| | recA | DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (350 aa) |
| | CBH21795.1 | Thermonuclease precursor (TNase) (Micrococcal nuclease) (Staphylococcal nuclease) (modular protein). (296 aa) |
| | CBH21780.1 | Putative molybdenum cofactor sulfurase (MOSC domain protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (143 aa) |
| | CBH21775.1 | Putative DNA repair protein (Nucleotide pyrophosphatase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the Nudix hydrolase family. (144 aa) |
| | CBH21756.1 | Homologs of previously reported genes of unknown function. (134 aa) |
| | CBH21754.1 | Rifampicin ADP ribosyl transferase. (136 aa) |
| | CBH21743.1 | CheY-related protein. (289 aa) |
| | cheX | Chemotaxis protein CheX. (148 aa) |
| | CBH21737.1 | Homologs of previously reported genes of unknown function. (244 aa) |
| | CBH21736.1 | Radical SAM domain protein. (428 aa) |
| | cheA | Two-component system, chemotaxis family, sensor kinase CheA; Function of homologous gene experimentally demonstrated in an other organism; regulator. (696 aa) |
| | yedW | DNA-binding response regulator in two-component system with YedV; Function of homologous gene experimentally demonstrated in an other organism; regulator. (225 aa) |
| | CBH21721.1 | Putative Sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (409 aa) |
| | CBH21708.1 | Chemotaxis protein cheV. (309 aa) |
| | CBH21683.1 | Homologs of previously reported genes of unknown function. (359 aa) |
| | CBH21662.1 | C-5 cytosine-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (466 aa) |
| | CBH21603.1 | Putative membrane-bound metal-dependent hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (261 aa) |
| | korA | 2-oxoglutarate synthase subunit korA (2-ketoglutarate oxidoreductase alpha chain) (KOR) (2-oxoglutarate-ferredoxin oxidoreductase subunit alpha). (382 aa) |
| | CBH21558.1 | FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (407 aa) |
| | polA | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. (888 aa) |
| | cheY | Regulator of chemotaxis and motility; Function of homologous gene experimentally demonstrated in an other organism; regulator. (120 aa) |
| | fliY | Flagellar motor switching and energizing phosphatase; Function of homologous gene experimentally demonstrated in an other organism; cell process. (383 aa) |
| | fliM | FliM. (332 aa) |
| | CBH21848.1 | Putative Flagellar basal body-associated protein FliL precursor; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. (141 aa) |
| | CBH21857.1 | Putative Flagellar export protein FliJ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (146 aa) |
| | fliG | Flagellar motor switching and energizing component; Function of homologous gene experimentally demonstrated in an other organism; cell process. (340 aa) |
| | CBH21873.1 | Homologs of previously reported genes of unknown function. (261 aa) |
| | ccpN | Putative transcriptional repressor CcpN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (214 aa) |
| | recO | DNA double strand break repair and homologous recombination factor; Involved in DNA repair and RecF pathway recombination. (248 aa) |
| | CBH21899.1 | Putative superoxide reductase (SOR); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (124 aa) |
| | dnaJ | Chaperone Hsp40, co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interaction [...] (382 aa) |
| | CBH21926.1 | Putative competence membrane protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (434 aa) |
| | CBH21930.1 | S-layer protein, putative (fragment). (301 aa) |
| | CBH21935.1 | 2-nitropropane dioxygenase, NPD. (336 aa) |
| | CBH21940.1 | Homologs of previously reported genes of unknown function. (204 aa) |
| | recG | RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (685 aa) |
| | arsC | Protein arsC (Arsenate reductase) (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase). (135 aa) |
| | mviN | Na+ driven multidrug efflux pump (MviN domain). (443 aa) |
| | CBH22007.1 | Sensor protein. (427 aa) |
| | phoB | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC); Function of homologous gene experimentally demonstrated in an other organism; regulator. (230 aa) |
| | ychF | Putative GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. (365 aa) |
| | degU | DegU. (211 aa) |
| | degS | Two-component sensor histidine kinase; Function of homologous gene experimentally demonstrated in an other organism; receptor. (392 aa) |
| | CBH22050.1 | Putative CheW protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (149 aa) |
| | sodA | Superoxide dismutase, Mn; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (203 aa) |
| | CBH22070.1 | Pyridine nucleotide-disulphide oxidoreductase family protein. (417 aa) |
| | CBH22079.1 | Homologs of previously reported genes of unknown function. (256 aa) |
| | hsdR | Putative Type I site-specific deoxyribonuclease; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1032 aa) |
| | CBH22089.1 | Restriction modification system DNA specificity domain. (405 aa) |
| | ogt | methylated-DNA--protein-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (152 aa) |
| | clpB-3 | Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family. (864 aa) |
| | nadR | Putative regulator of de-novo NAD biosythesis NadR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (173 aa) |
| | CBH22125.1 | Glyoxalase family protein superfamily. (137 aa) |
| | exoA | Exodeoxyribonuclease III. (250 aa) |
| | ahpC | Alkyl hydroperoxide reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (173 aa) |
| | CBH22171.1 | Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain. (332 aa) |
| | CBH22201.1 | Homologs of previously reported genes of unknown function. (157 aa) |
| | CBH22271.1 | Exported protein of unknown function; No homology to any previously reported sequences. (592 aa) |
| | CBH22346.1 | Methyl-accepting chemotaxis sensory transducer precursor. (678 aa) |
| | CBH22350.1 | Putative uncharacterized protein (PrdD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (254 aa) |
| | CBH22378.1 | Sensor protein. (393 aa) |
| | yedW-2 | DNA-binding response regulator in two-component system with YedV; Function of homologous gene experimentally demonstrated in an other organism; regulator. (231 aa) |
| | CBH22381.1 | Putative sensory box-containing diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (639 aa) |
| | CBH22398.1 | Membrane protein of unknown function; No homology to any previously reported sequences. (805 aa) |
| | CBH22399.1 | Protein of unknown function; No homology to any previously reported sequences. (346 aa) |
| | CBH22400.1 | Protein of unknown function; No homology to any previously reported sequences. (568 aa) |
| | rex | Redox regulator Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (209 aa) |
| | CBH22444.1 | Putative transcriptional regulator YhcZ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (222 aa) |
| | CBH22471.1 | Protein of unknown function; No homology to any previously reported sequences. (190 aa) |
| | recD2 | Putative DNA-binding protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. (747 aa) |
| | sigV | SigV; Belongs to the sigma-70 factor family. ECF subfamily. (160 aa) |
| | CBH22492.1 | Putative sensory box-containing diguanylate cyclase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (502 aa) |
| | CBH22497.1 | Exported protein of unknown function; No homology to any previously reported sequences. (178 aa) |
| | CBH22498.1 | Response regulator receiver protein. (120 aa) |
| | CBH22499.1 | CheC, inhibitor of MCP methylation. (206 aa) |
| | CBH22519.1 | Pyridoxamine 5'-phosphate oxidase-related FMN-binding. (154 aa) |
| | btuE | Putative glutathione peroxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the glutathione peroxidase family. (181 aa) |
| | CBH22523.1 | Putative peroxiredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (240 aa) |
| | CBH22534.1 | Protein of unknown function; No homology to any previously reported sequences. (250 aa) |
| | CBH22550.1 | Response regulator receiver modulated metal dependent phosphohydrolase. (523 aa) |
| | CBH22551.1 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (701 aa) |
| | CBH22552.1 | Methyl-accepting chemotaxis sensory transducer. (312 aa) |
| | CBH22553.1 | Methyl-accepting chemotaxis sensory transducer. (667 aa) |
| | CBH22562.1 | Putative glutathione peroxidase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme; Belongs to the glutathione peroxidase family. (161 aa) |
| | CBH22565.1 | Homologs of previously reported genes of unknown function. (199 aa) |
| | msrB | Methionine sulfoxide reductase B; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (148 aa) |
| | CBH22611.1 | ABC transporter, permease protein. (771 aa) |
| | alkA | DNA-3-methyladenine glycosidase. (305 aa) |
| | CBH22622.1 | ATP-dependent DNA helicase. (600 aa) |
| | CBH22645.1 | Protein of unknown function; No homology to any previously reported sequences. (582 aa) |
| | yycG | Sensory box histidine kinase yycg. (602 aa) |
| | phoB-2 | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC); Function of homologous gene experimentally demonstrated in an other organism; regulator. (231 aa) |
| | CBH20306.1 | Methyl-accepting chemotaxis sensory transducer precursor. (581 aa) |
| | CBH20317.1 | Putative Fimbrial protein precursor (Pilin) (Strain K122-4); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (129 aa) |
| | addB | ATP-dependent deoxyribonuclease (subunit B); ATP-dependent DNA helicase. (1118 aa) |
| | addA | ATP-dependent nuclease, subunit A; ATP-dependent DNA helicase. (1184 aa) |
| | hcp | Hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O. (543 aa) |
| | CBH20364.1 | Methyl-accepting chemotaxis sensory transducer precursor. (667 aa) |
| | CBH20370.1 | DNA-binding response regulator. (228 aa) |
| | CBH20371.1 | Sensor histidine kinase. (474 aa) |
| | CBH20374.1 | Ethanolamine utilization response regulator. (200 aa) |
| | CBH20413.1 | Putative DNA glycosylase (DNA repair protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (293 aa) |
| | CBH20423.1 | MATE efflux family protein. (449 aa) |
| | CBH20438.1 | Cytosine-specific methyltransferase. (344 aa) |
| | CBH20440.1 | Cytosine-specific methyltransferase. (326 aa) |
| | CBH20461.1 | Protein of unknown function; No homology to any previously reported sequences. (610 aa) |
| | CBH20470.1 | Protein of unknown function; No homology to any previously reported sequences. (487 aa) |
| | yabO | YabO. (80 aa) |
| | CBH20502.1 | Exported protein of unknown function; No homology to any previously reported sequences. (780 aa) |
| | CBH20535.1 | Exported protein of unknown function; No homology to any previously reported sequences. (669 aa) |
| | CBH20536.1 | Methyl-accepting chemotaxis sensory transducer precursor. (690 aa) |
| | CBH20537.1 | Methyl-accepting chemotaxis sensory transducer. (743 aa) |
| | CBH20566.1 | Protein of unknown function; No homology to any previously reported sequences. (180 aa) |
| | CBH20570.1 | Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (364 aa) |
| | mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1130 aa) |
| | dacA | Conserved protein of unknown function; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (271 aa) |
| | vorB | Ketoisovalerate oxidoreductase subunit vorB (VOR) (2-oxoisovalerate oxidoreductase beta chain) (2-oxoisovalerate ferredoxin reductase subunit beta). (351 aa) |
| | uvrB | Excinulease of nucleotide excision repair, DNA damage recognition component; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. I [...] (654 aa) |
| | uvrA | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (942 aa) |
| | CBH20636.1 | Two-component response regulator yhcZ. (213 aa) |
| | CBH20641.1 | Membrane protein of unknown function; No homology to any previously reported sequences. (438 aa) |
| | CBH20642.1 | Homologs of previously reported genes of unknown function. (244 aa) |
| | CBH20665.1 | Histidine kinase internal region. (503 aa) |
| | CBH20666.1 | Putative Response regulator receiver protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (515 aa) |
| | uvrC | UvrABC system protein C (Protein uvrC) (Excinuclease ABC subunit C); The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (587 aa) |
| | hprK | HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...] (322 aa) |
| | CBH20685.1 | Protein of unknown function; No homology to any previously reported sequences. (415 aa) |
| | ligA | DNA ligase, NAD(+)-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. (683 aa) |
| | lon | DNA-binding ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (791 aa) |
| | CBH20734.1 | Methyl-accepting chemotaxis sensory transducer. (498 aa) |
| | CBH20735.1 | Protein of unknown function; No homology to any previously reported sequences. (674 aa) |
| | CBH20736.1 | Homologs of previously reported genes of unknown function. (739 aa) |
| | CBH20796.1 | Exported protein of unknown function; No homology to any previously reported sequences. (642 aa) |
| | CBH20816.1 | Membrane protein of unknown function; No homology to any previously reported sequences. (652 aa) |
| | CBH20850.1 | Excinuclease ABC C subunit domain protein. (302 aa) |
| | CBH20853.1 | Homologs of previously reported genes of unknown function. (244 aa) |
| | CBH20857.1 | Radical SAM domain protein. (304 aa) |
| | CBH20861.1 | Homologs of previously reported genes of unknown function. (688 aa) |
| | CBH20862.1 | Homologs of previously reported genes of unknown function. (628 aa) |
| | CBH20877.1 | Diguanylate cyclase. (524 aa) |
| | porA | Pyruvate synthase subunit porA (Pyruvate oxidoreductase alpha chain) (POR) (Pyruvic-ferredoxin oxidoreductase subunit alpha). (393 aa) |
| | CBH20887.1 | Protein of unknown function; No homology to any previously reported sequences. (548 aa) |
| | arsB | Arsenite efflux transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter. (348 aa) |
| | CBH20920.1 | Homologs of previously reported genes of unknown function. (159 aa) |
| | CBH20925.1 | Nitrite and sulphite reductase 4Fe-4S region (fragment). (60 aa) |
| | CBH20937.1 | Modification methylase Sau3AI (Cytosine-specific methyltransferase Sau3AI) (M.Sau3AI) (fragment). (219 aa) |
| | CBH20938.1 | Modification methylase Sau3AI (Cytosine-specific methyltransferase Sau3AI) (M.Sau3AI) (fragment). (49 aa) |
| | CBH20974.1 | Glutaredoxin. (76 aa) |
| | baeR | DNA-binding response regulator in two-component regulatory system with BaeS; Function of homologous gene experimentally demonstrated in an other organism; regulator. (227 aa) |
| | CBH20995.1 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (475 aa) |
| | CBH21010.1 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (728 aa) |
| | CBH21011.1 | Protein of unknown function; No homology to any previously reported sequences. (376 aa) |
| | CBH21012.1 | Putative RNA methylase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (331 aa) |
| | CBH21021.1 | Dioxygenase related to 2-nitropropane dioxygenase. (316 aa) |
| | nror | NADH:Rubredoxin oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; carrier. (390 aa) |
| | uppP | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. (272 aa) |
| | CBH21084.1 | Histidine kinase, HAMP region:chemotaxis sensory transducer precursor. (674 aa) |
| | recF | DNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (361 aa) |
| | CBH20161.1 | Methyl-accepting chemotaxis sensory transducer precursor. (693 aa) |
| | CBH20162.1 | Membrane associated methyl-accepting chemotaxis protein (With HAMP domain). (682 aa) |
| | rbr | Rubrerythrin (RR). (200 aa) |
| | uvrX | Lesion bypass phage DNA polymerase; Function of strongly homologous gene; enzyme. (435 aa) |
| | CBH21500.1 | Putative MutS-like ATPases involved in mismatch repair, family 2. (486 aa) |
| | CBH21481.1 | Putative competence protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (205 aa) |
| | tpx | Putative peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. (170 aa) |
| | CBH21476.1 | Two-component response regulator yycF. (228 aa) |
| | CBH21475.1 | Histidine kinase (fragment). (316 aa) |
| | CBH21464.1 | Homologs of previously reported genes of unknown function. (149 aa) |
| | recN | Factor for double strand breaks DNA repair and genetic recombination; May be involved in recombinational repair of damaged DNA. (559 aa) |
| | CBH21448.1 | Penicillin-binding protein, 1A family precursor. (835 aa) |
| | CBH21439.1 | MATE efflux family protein. (460 aa) |
| | ruvC | Component of RuvABC resolvasome, endonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (163 aa) |
| | ruvA | Component of RuvABC resolvasome, regulatory subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (199 aa) |
| | ruvB | ATP-dependent DNA helicase, component of RuvABC resolvasome; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (333 aa) |
| | recJ | Putative single-stranded-DNA-specific exonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (777 aa) |
| | CBH21388.1 | Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (699 aa) |
