STRINGSTRING
kduI1 kduI1 AJA07761.1 AJA07761.1 AJA07762.1 AJA07762.1 AJA07763.1 AJA07763.1 AJA07764.1 AJA07764.1 AJA07766.1 AJA07766.1 AJA07767.1 AJA07767.1 AJA07768.1 AJA07768.1 AJA07769.1 AJA07769.1 AJA07770.1 AJA07770.1 AJA07886.1 AJA07886.1 AJA10742.1 AJA10742.1 AJA10765.1 AJA10765.1 uxaC uxaC AJA10767.1 AJA10767.1 AJA10768.1 AJA10768.1 kduD kduD kduI2 kduI2 AJA10772.1 AJA10772.1 AJA10822.1 AJA10822.1 AJA10823.1 AJA10823.1 rspA rspA AJA10826.1 AJA10826.1 AJA10827.1 AJA10827.1 AJA10828.1 AJA10828.1 AJA10829.1 AJA10829.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kduI14-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (280 aa)
AJA07761.1TonB-dependent receptor. (1012 aa)
AJA07762.1Poly(beta-D-mannuronate) lyase. (738 aa)
AJA07763.1Alginate lyase. (720 aa)
AJA07764.1Major facilitator superfamily protein. (427 aa)
AJA07766.1G-D-S-L family lipolytic protein. (279 aa)
AJA07767.1TonB dependent receptor protein. (951 aa)
AJA07768.1Esterase/lipase. (295 aa)
AJA07769.1GntR family transcriptional regulator. (248 aa)
AJA07770.1Hypothetical protein. (223 aa)
AJA07886.1Major facilitator transporter. (411 aa)
AJA10742.1Short-chain dehydrogenase/reductase SDR. (267 aa)
AJA10765.1Mannitol dehydrogenase-like protein. (440 aa)
uxaCUronate isomerase. (470 aa)
AJA10767.1Major facilitator superfamily transporter. (435 aa)
AJA10768.12-keto-4-pentenoate hydratase. (261 aa)
kduD2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase. (256 aa)
kduI24-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (280 aa)
AJA10772.1LacI family transcriptional regulator. (349 aa)
AJA10822.1GntR family transcriptional regulator. (235 aa)
AJA10823.1Hypothetical protein. (301 aa)
rspAStarvation-sensing protein RspA. (403 aa)
AJA10826.1Glycosyl Hydrolase Family 88 family protein. (383 aa)
AJA10827.1TonB-dependent receptor. (980 aa)
AJA10828.1Hypothetical protein. (412 aa)
AJA10829.1Alginate lyase. (386 aa)
Your Current Organism:
Sphingopyxis fribergensis
NCBI taxonomy Id: 1515612
Other names: DSM 28731, LMG 28478, LMG:28478, S. fribergensis, Sphingopyxis fribergensis Oelschlagel et al. 2015, Sphingopyxis sp. Kp5.2, strain Kp5.2
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