STRINGSTRING
AJA09431.1 AJA09431.1 AJA10620.1 AJA10620.1 abcB5 abcB5 AJA10711.1 AJA10711.1 AJA11301.1 AJA11301.1 AJA11446.1 AJA11446.1 cobQ cobQ cobD cobD AJA11539.1 AJA11539.1 AJA08176.1 AJA08176.1 ccmA ccmA AJA08542.1 AJA08542.1 AJA08572.1 AJA08572.1 AJA08689.1 AJA08689.1 AJA08113.1 AJA08113.1 AJA08823.1 AJA08823.1 potA potA cyaB cyaB AJA08081.1 AJA08081.1 AJA07730.1 AJA07730.1 AJA07714.1 AJA07714.1 AJA07534.1 AJA07534.1 AJA07235.1 AJA07235.1 AJA09451.1 AJA09451.1 AJA09618.1 AJA09618.1 AJA09711.1 AJA09711.1 AJA09868.1 AJA09868.1 modC modC AJA10596.1 AJA10596.1 AJA10619.1 AJA10619.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJA09431.1Binding-protein-dependent transport system inner membrane protein. (298 aa)
AJA10620.1Phosphonate ABC transporter permease. (331 aa)
abcB5ABC transporter B family member 5. (604 aa)
AJA10711.1TonB-dependent receptor. (1022 aa)
AJA11301.1Hypothetical protein. (586 aa)
AJA11446.1Putative amino-acid ABC transporter ATP-binding protein. (250 aa)
cobQCobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (483 aa)
cobDCobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (312 aa)
AJA11539.1TonB-dependent receptor. (652 aa)
AJA08176.1TonB-dependent receptor. (1029 aa)
ccmACytochrome c biogenesis ATP-binding export protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system. (194 aa)
AJA08542.1Hypothetical protein. (786 aa)
AJA08572.1Type I secretion system ABC transporter, PrtD family. (584 aa)
AJA08689.1TonB-dependent receptor. (1074 aa)
AJA08113.1Outer membrane cobalamin receptor protein. (902 aa)
AJA08823.1Binding-protein-dependent transport system inner membrane protein. (301 aa)
potASpermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (376 aa)
cyaBCyclolysin secretion/processing ATP-binding protein CyaB. (717 aa)
AJA08081.1Type I secretion system ABC transporter, PrtD family. (584 aa)
AJA07730.1TonB-dependent receptor. (1000 aa)
AJA07714.1TonB-dependent receptor-like protein. (1002 aa)
AJA07534.1ABC transporter. (594 aa)
AJA07235.1Hypothetical protein. (120 aa)
AJA09451.1TonB-dependent receptor. (614 aa)
AJA09618.1TonB-dependent receptor. (978 aa)
AJA09711.1Outer membrane cobalamin receptor protein. (911 aa)
AJA09868.1TonB-dependent receptor. (1013 aa)
modCMolybdenum import ATP-binding protein ModC. (206 aa)
AJA10596.1TonB-dependent receptor. (891 aa)
AJA10619.1Phosphonate ABC transporter ATP-binding protein 1. (240 aa)
Your Current Organism:
Sphingopyxis fribergensis
NCBI taxonomy Id: 1515612
Other names: DSM 28731, LMG 28478, LMG:28478, S. fribergensis, Sphingopyxis fribergensis Oelschlagel et al. 2015, Sphingopyxis sp. Kp5.2, strain Kp5.2
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