STRINGSTRING
cyaB cyaB AJA11301.1 AJA11301.1 AJA07534.1 AJA07534.1 AJA08081.1 AJA08081.1 AJA08572.1 AJA08572.1 abcB5 abcB5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cyaBCyclolysin secretion/processing ATP-binding protein CyaB. (717 aa)
AJA11301.1Hypothetical protein. (586 aa)
AJA07534.1ABC transporter. (594 aa)
AJA08081.1Type I secretion system ABC transporter, PrtD family. (584 aa)
AJA08572.1Type I secretion system ABC transporter, PrtD family. (584 aa)
abcB5ABC transporter B family member 5. (604 aa)
Your Current Organism:
Sphingopyxis fribergensis
NCBI taxonomy Id: 1515612
Other names: DSM 28731, LMG 28478, LMG:28478, S. fribergensis, Sphingopyxis fribergensis Oelschlagel et al. 2015, Sphingopyxis sp. Kp5.2, strain Kp5.2
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