STRINGSTRING
aksA aksA AJG96918.1 AJG96918.1 buk buk AJG96997.1 AJG96997.1 AJG97024.1 AJG97024.1 AJG97025.1 AJG97025.1 mmgB mmgB AJG97113.1 AJG97113.1 AJG97393.1 AJG97393.1 AJG97427.1 AJG97427.1 AJG97429.2 AJG97429.2 AJG97682.1 AJG97682.1 eutD eutD ackA ackA garR garR AJG98768.1 AJG98768.1 AJG98769.2 AJG98769.2 AJG98792.1 AJG98792.1 acdA_1 acdA_1 phaJ_2 phaJ_2 AJG98798.1 AJG98798.1 AJG99404.1 AJG99404.1 AJG99405.2 AJG99405.2 AJG99880.1 AJG99880.1 camK_1 camK_1 AJH00318.1 AJH00318.1 phaJ phaJ AJH00389.1 AJH00389.1 atoB atoB ydiF_4 ydiF_4 AJH00844.2 AJH00844.2 AJH00857.1 AJH00857.1 ctfA ctfA AJH00859.1 AJH00859.1 adc adc buk-2 buk-2 AJH01087.1 AJH01087.1 pduL pduL bssA_1 bssA_1 AJH01282.1 AJH01282.1 AJH01598.1 AJH01598.1 AJH01599.1 AJH01599.1 AJH01600.1 AJH01600.1 AJH01659.1 AJH01659.1 buk2_3 buk2_3 AMK50376.1 AMK50376.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
aksAHomoaconitate hydratase; In Methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family. (389 aa)
AJG96918.1Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
bukButyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family. (355 aa)
AJG96997.1Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (860 aa)
AJG97024.1Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
AJG97025.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
mmgB3-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
AJG97113.1acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
AJG97393.1Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (801 aa)
AJG97427.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (484 aa)
AJG97429.2Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (493 aa)
AJG97682.1Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)
eutDPhosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
ackAAcetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (400 aa)
garROxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
AJG98768.1Isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (304 aa)
AJG98769.2Homocitrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family. (250 aa)
AJG98792.1Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
acdA_1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
phaJ_2enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
AJG98798.1CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 3-oxoacid CoA-transferase family. (518 aa)
AJG99404.1Branched-chain amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
AJG99405.2Acetate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
AJG99880.1Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
camK_1Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
AJH00318.13-oxoacid CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 3-oxoacid CoA-transferase family. (515 aa)
phaJenoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
AJH00389.1CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 3-oxoacid CoA-transferase family. (514 aa)
atoBacetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family. (392 aa)
ydiF_4CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 3-oxoacid CoA-transferase family. (508 aa)
AJH00844.23-hydroxybutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
AJH00857.1Aldehyde dehydrogenase EutE; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)
ctfABranched-chain amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
AJH00859.1Acetate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
adcAcetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family. (246 aa)
buk-2Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family. (356 aa)
AJH01087.1Aldehyde dehydrogenase EutE; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
pduLPhosphate propanoyltransferase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate. (212 aa)
bssA_1Glycyl radical enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (844 aa)
AJH01282.1Acylphosphatase; Catalyzes the hydrolysis of acylphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (90 aa)
AJH01598.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (379 aa)
AJH01599.13-oxoacid CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 3-oxoacid CoA-transferase family. (517 aa)
AJH01600.1Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
AJH01659.13-oxoacid CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 3-oxoacid CoA-transferase family. (516 aa)
buk2_3Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family. (356 aa)
AMK50376.1Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (466 aa)
Your Current Organism:
Clostridium beijerinckii
NCBI taxonomy Id: 1520
Other names: ATCC 25752, BCRC 14488, C. beijerinckii, CCUG 56442, CIP 104308, Clostridium rubrum, Clostridium sp. H18, DSM 791, LMG 5716, LMG:5716, NCIMB 9362, NCTC 13035
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