STRINGSTRING
AJH00676.1 AJH00676.1 AJH00677.1 AJH00677.1 AJH00678.1 AJH00678.1 AJH00679.1 AJH00679.1 lgrE_2 lgrE_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJH00676.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1227 aa)
AJH00677.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1720 aa)
AJH00678.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (1096 aa)
AJH00679.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (649 aa)
lgrE_2Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)
Your Current Organism:
Clostridium beijerinckii
NCBI taxonomy Id: 1520
Other names: ATCC 25752, BCRC 14488, C. beijerinckii, CCUG 56442, CIP 104308, Clostridium rubrum, Clostridium sp. H18, DSM 791, LMG 5716, LMG:5716, NCIMB 9362, NCTC 13035
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