STRINGSTRING
AJG98117.1 AJG98117.1 ldh-3 ldh-3 tpiA tpiA uxuA uxuA glcD glcD kduI kduI uxuA-3 uxuA-3 kduI1 kduI1 fucA fucA ldh ldh uxuA_1 uxuA_1 AJH01658.1 AJH01658.1 uxuA_2 uxuA_2 pyk_3 pyk_3 ldh-2 ldh-2 pyk_2 pyk_2 uxuA-2 uxuA-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJG98117.1Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family. (340 aa)
ldh-3L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (316 aa)
tpiATriose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (248 aa)
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (355 aa)
glcD2-hydroxy-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
kduI5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (278 aa)
uxuA-3Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (360 aa)
kduI15-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (278 aa)
fucAAldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
ldhL-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (316 aa)
uxuA_1Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (353 aa)
AJH01658.1Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
uxuA_2Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (353 aa)
pyk_3Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
ldh-2L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. (315 aa)
pyk_2Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
uxuA-2Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (347 aa)
Your Current Organism:
Clostridium beijerinckii
NCBI taxonomy Id: 1520
Other names: ATCC 25752, BCRC 14488, C. beijerinckii, CCUG 56442, CIP 104308, Clostridium rubrum, Clostridium sp. H18, DSM 791, LMG 5716, LMG:5716, NCIMB 9362, NCTC 13035
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