(12 nodes) (2017) First Insights into the Genome of the Cr(VI)-Reducing Bacterium Clostridium chromiireducens DSM 23318. network (Clostridium beijerinckii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Known Interactions

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Predicted Interactions

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protein homology

Your Input:
	buk	Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family. (355 aa)
	fur_1	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (137 aa)
	AJG96918.1	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
	AJG97680.1	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)
	AJG97682.1	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (743 aa)
	fur_2	Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (154 aa)
	eutD	Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	ackA	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (400 aa)
	perR	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family. (135 aa)
	AJG98321.1	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (327 aa)
	buk-2	Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family. (356 aa)
	buk2_3	Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family. (356 aa)

Your Current Organism:

Clostridium beijerinckii

NCBI taxonomy Id: 1520
Other names: ATCC 25752, BCRC 14488, C. beijerinckii, CCUG 56442, CIP 104308, Clostridium rubrum, Clostridium sp. H18, DSM 791, LMG 5716, LMG:5716, NCIMB 9362, NCTC 13035

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJG96918.1	AJG97680.1	LF65_00241	LF65_01061	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
AJG96918.1	AJG97682.1	LF65_00241	LF65_01063	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
AJG96918.1	ackA	LF65_00241	LF65_01290	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	0.986
AJG96918.1	buk	LF65_00241	LF65_00242	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family.	0.998
AJG96918.1	buk-2	LF65_00241	LF65_04509	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family.	0.997
AJG96918.1	buk2_3	LF65_00241	LF65_05155	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family.	0.997
AJG97680.1	AJG96918.1	LF65_01061	LF65_00241	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
AJG97680.1	ackA	LF65_01061	LF65_01290	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	0.598
AJG97680.1	eutD	LF65_01061	LF65_01289	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AJG97682.1	AJG96918.1	LF65_01063	LF65_00241	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.418
AJG97682.1	ackA	LF65_01063	LF65_01290	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	0.598
AJG97682.1	eutD	LF65_01063	LF65_01289	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.947
AJG98321.1	ackA	LF65_01718	LF65_01290	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	0.497
AJG98321.1	buk	LF65_01718	LF65_00242	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family.	0.439
AJG98321.1	buk-2	LF65_01718	LF65_04509	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family.	0.439
AJG98321.1	buk2_3	LF65_01718	LF65_05155	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Butyrate kinase; Catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetokinase family.	0.439
AJG98321.1	eutD	LF65_01718	LF65_01289	Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Phosphate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.567
ackA	AJG96918.1	LF65_01290	LF65_00241	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	Phosphate butyryltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.986
ackA	AJG97680.1	LF65_01290	LF65_01061	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598
ackA	AJG97682.1	LF65_01290	LF65_01063	Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.	Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.598

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