STRINGSTRING
cwlD cwlD htrA htrA AJG97824.1 AJG97824.1 AJG99395.1 AJG99395.1 AJH01063.2 AJH01063.2 AJH01221.1 AJH01221.1 dltC_1 dltC_1 AJH01383.1 AJH01383.1 dltA_2 dltA_2 AJH01386.1 AJH01386.1 AJH01761.1 AJH01761.1 AJH01762.1 AJH01762.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cwlDN-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
htrASerine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
AJG97824.1D-alanine--poly(phosphoribitol) ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
AJG99395.1Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
AJH01063.2Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
AJH01221.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (517 aa)
dltC_1D-alanine--poly(phosphoribitol) ligase subunit 2; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. (75 aa)
AJH01383.1D-alanyl-lipoteichoic acid biosynthesis protein DltB; Could be involved in the transport of activated D-alanine through the membrane. (384 aa)
dltA_2D-alanine--poly(phosphoribitol) ligase; Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA), the activation of D-alanine and its transfer onto the D- alanyl carrier protein (Dcp) DltC. In an ATP-dependent two-step reaction, forms a high energy D-alanyl-AMP intermediate, followed by transfer of the D-alanyl residue as a thiol ester to the phosphopantheinyl prosthetic group of the Dcp. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall. Belongs to the ATP-de [...] (504 aa)
AJH01386.1D-alanyl-lipoteichoic acid biosynthesis protein DltD; Derived by automated computational analysis using gene prediction method: Protein Homology. (394 aa)
AJH01761.1Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (661 aa)
AJH01762.1Cell wall hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (756 aa)
Your Current Organism:
Clostridium beijerinckii
NCBI taxonomy Id: 1520
Other names: ATCC 25752, BCRC 14488, C. beijerinckii, CCUG 56442, CIP 104308, Clostridium rubrum, Clostridium sp. H18, DSM 791, LMG 5716, LMG:5716, NCIMB 9362, NCTC 13035
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