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pcnB pcnB tsaC_2-2 tsaC_2-2 polA polA glk glk cdsA cdsA GCA_900177895_02186 GCA_900177895_02186 glmU glmU arcC1 arcC1 dnaN dnaN pyrH pyrH pgk pgk GCA_900177895_01319 GCA_900177895_01319 anmK anmK GCA_900177895_01252 GCA_900177895_01252 holB holB holA holA moaB moaB mobA mobA narX narX kinB_2 kinB_2 ackA ackA pnp pnp thrB thrB zraS zraS acpS acpS GCA_900177895_00876 GCA_900177895_00876 cca cca folK folK GCA_900177895_00839 GCA_900177895_00839 GCA_900177895_00838 GCA_900177895_00838 ubiB ubiB mraY mraY cheA_3 cheA_3 dgkA dgkA galT galT galK galK hddC hddC cptA cptA cmk cmk coaE coaE pseB pseB kinB_1 kinB_1 tmk tmk ppsR ppsR dinB dinB eptC eptC ptsN ptsN hprK hprK rfaE rfaE dnaE dnaE ptsI ptsI manX manX ispD ispD dnaQ dnaQ GCA_900177895_00402 GCA_900177895_00402 kdsB kdsB pykA pykA GCA_900177895_00319 GCA_900177895_00319 rmlA2 rmlA2 ppsA ppsA ribF ribF glnD glnD thiF thiF GCA_900177895_01513 GCA_900177895_01513 rph rph adk adk lysC lysC GCA_900177895_01553 GCA_900177895_01553 rpoZ rpoZ gmk gmk neuA neuA cheA_2 cheA_2 GCA_900177895_01620 GCA_900177895_01620 aroK aroK polC polC pgsA pgsA vbhT vbhT dnaX dnaX dnaG_2 dnaG_2 GCA_900177895_01767 GCA_900177895_01767 ppk ppk prs prs ispE ispE relA relA cpxA cpxA GCA_900177895_01839 GCA_900177895_01839 coaD coaD GCA_900177895_01864 GCA_900177895_01864 thiN thiN ppnK ppnK lpxK lpxK glnE glnE cheA_1 cheA_1 slyX slyX birA birA GCA_900177895_02021 GCA_900177895_02021 GCA_900177895_02022 GCA_900177895_02022 ywqK ywqK ctrB ctrB thiD thiD thiM thiM rpoB rpoB rpoC rpoC rpoA rpoA nadD nadD gtaB_2 gtaB_2 gtaB_1 gtaB_1
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pcnBUnannotated protein; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (442 aa)
tsaC_2-2Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate. (190 aa)
polAUnannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (919 aa)
glkUnannotated protein; Belongs to the bacterial glucokinase family. (330 aa)
cdsAUnannotated protein; Belongs to the CDS family. (264 aa)
GCA_900177895_02186Unannotated protein. (414 aa)
glmUUnannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (455 aa)
arcC1Unannotated protein; Belongs to the carbamate kinase family. (313 aa)
dnaNUnannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] (367 aa)
pyrHUnannotated protein; Catalyzes the reversible phosphorylation of UMP to UDP. (238 aa)
pgkUnannotated protein; Belongs to the phosphoglycerate kinase family. (392 aa)
GCA_900177895_01319Unannotated protein. (246 aa)
anmKUnannotated protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. (367 aa)
GCA_900177895_01252Unannotated protein. (358 aa)
holBUnannotated protein. (323 aa)
holAUnannotated protein. (336 aa)
moaBUnannotated protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family. (186 aa)
mobAUnannotated protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. (194 aa)
narXUnannotated protein. (628 aa)
kinB_2Unannotated protein. (698 aa)
ackAUnannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (398 aa)
pnpUnannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (715 aa)
thrBUnannotated protein; Belongs to the pseudomonas-type ThrB family. (311 aa)
zraSUnannotated protein. (541 aa)
acpSUnannotated protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (126 aa)
GCA_900177895_00876Unannotated protein. (163 aa)
ccaUnannotated protein; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. (415 aa)
folKUnannotated protein. (163 aa)
GCA_900177895_00839Unannotated protein. (96 aa)
GCA_900177895_00838Unannotated protein. (71 aa)
ubiBUnannotated protein; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. (503 aa)
mraYUnannotated protein; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. (361 aa)
cheA_3Unannotated protein. (678 aa)
dgkAUnannotated protein; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. (126 aa)
galTUnannotated protein. (344 aa)
galKUnannotated protein; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (382 aa)
hddCUnannotated protein. (234 aa)
cptAUnannotated protein. (537 aa)
cmkUnannotated protein. (217 aa)
coaEUnannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. (202 aa)
pseBUnannotated protein. (332 aa)
kinB_1Unannotated protein. (84 aa)
tmkUnannotated protein; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. (209 aa)
ppsRUnannotated protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation. (269 aa)
dinBUnannotated protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (350 aa)
eptCUnannotated protein. (562 aa)
ptsNUnannotated protein. (148 aa)
hprKUnannotated protein; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). (321 aa)
rfaEUnannotated protein. (316 aa)
dnaEUnannotated protein. (1152 aa)
ptsIUnannotated protein; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (582 aa)
manXUnannotated protein. (131 aa)
ispDUnannotated protein; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (232 aa)
dnaQUnannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (244 aa)
GCA_900177895_00402Unannotated protein; Belongs to the UPF0434 family. (60 aa)
kdsBUnannotated protein; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. (251 aa)
pykAUnannotated protein; Belongs to the pyruvate kinase family. (489 aa)
GCA_900177895_00319Unannotated protein. (311 aa)
rmlA2Unannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (288 aa)
ppsAUnannotated protein; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (798 aa)
ribFUnannotated protein; Belongs to the ribF family. (308 aa)
glnDUnannotated protein; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism. (826 aa)
thiFUnannotated protein. (245 aa)
GCA_900177895_01513Unannotated protein. (290 aa)
rphUnannotated protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (241 aa)
adkUnannotated protein; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. (215 aa)
lysCUnannotated protein; Belongs to the aspartokinase family. (407 aa)
GCA_900177895_01553Unannotated protein. (85 aa)
rpoZUnannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (68 aa)
gmkUnannotated protein; Essential for recycling GMP and indirectly, cGMP. (205 aa)
neuAUnannotated protein. (231 aa)
cheA_2Unannotated protein. (91 aa)
GCA_900177895_01620Unannotated protein. (102 aa)
aroKUnannotated protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (181 aa)
polCUnannotated protein. (464 aa)
pgsAUnannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (187 aa)
vbhTUnannotated protein. (199 aa)
dnaXUnannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (660 aa)
dnaG_2Unannotated protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (586 aa)
GCA_900177895_01767Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (289 aa)
ppkUnannotated protein; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (685 aa)
prsUnannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (342 aa)
ispEUnannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (282 aa)
relAUnannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (737 aa)
cpxAUnannotated protein. (481 aa)
GCA_900177895_01839Unannotated protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. (163 aa)
coaDUnannotated protein; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (169 aa)
GCA_900177895_01864Unannotated protein. (293 aa)
thiNUnannotated protein. (243 aa)
ppnKUnannotated protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. (294 aa)
lpxKUnannotated protein; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). (351 aa)
glnEUnannotated protein; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) [...] (895 aa)
cheA_1Unannotated protein. (702 aa)
slyXUnannotated protein; Belongs to the SlyX family. (72 aa)
birAUnannotated protein; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis. (562 aa)
GCA_900177895_02021Unannotated protein. (355 aa)
GCA_900177895_02022Unannotated protein. (568 aa)
ywqKUnannotated protein. (184 aa)
ctrBUnannotated protein. (395 aa)
thiDUnannotated protein. (270 aa)
thiMUnannotated protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. (272 aa)
rpoBUnannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1398 aa)
rpoCUnannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1399 aa)
rpoAUnannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (328 aa)
nadDUnannotated protein; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). (201 aa)
gtaB_2Unannotated protein. (295 aa)
gtaB_1Unannotated protein. (468 aa)
Your Current Organism:
Kingella negevensis
NCBI taxonomy Id: 1522312
Other names: CCUG 69806, CSUR P957, K. negevensis, Kingella negevensis El Houmami et al. 2017, Kingella sp. AA267, Kingella sp. AA503, Kingella sp. BB632, Kingella sp. BB713, Kingella sp. CC132, Kingella sp. CC173_6, Kingella sp. CC505b, Kingella sp. CC546, Kingella sp. CHUV31, Kingella sp. D2292, Kingella sp. D2756, Kingella sp. D7323, Kingella sp. EE451, Kingella sp. EPA009, Kingella sp. EPA014, Kingella sp. PED555, Kingella sp. PVC1712, Kingella sp. PVC1735, Kingella sp. SW7208426, Kingella sp. Sch1437, Kingella sp. Sch538, Kingella sp. Sch690, strain Sch538
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