STRINGSTRING
pdhD pdhD strB1 strB1 GCA_900177895_01767 GCA_900177895_01767 lysC lysC ydfG ydfG serC serC GCA_900177895_01493 GCA_900177895_01493 GCA_900177895_01398 GCA_900177895_01398 ilvA ilvA trpB trpB trpA trpA arsC arsC hom hom GCA_900177895_01215 GCA_900177895_01215 GCA_900177895_01072 GCA_900177895_01072 thrB thrB spxA spxA serB serB lpdA lpdA sdaA sdaA GCA_900177895_00510 GCA_900177895_00510 glyA2 glyA2 GCA_900177895_00293 GCA_900177895_00293 GCA_900177895_00164 GCA_900177895_00164 gpmA_2 gpmA_2 GCA_900177895_00129 GCA_900177895_00129 asd asd hprA hprA GCA_900177895_00110 GCA_900177895_00110 gpmA_1 gpmA_1 fldH fldH thrC thrC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
pdhDUnannotated protein. (468 aa)
strB1Unannotated protein. (376 aa)
GCA_900177895_01767Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (289 aa)
lysCUnannotated protein; Belongs to the aspartokinase family. (407 aa)
ydfGUnannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (283 aa)
serCUnannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (366 aa)
GCA_900177895_01493Unannotated protein. (179 aa)
GCA_900177895_01398Unannotated protein. (96 aa)
ilvAUnannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. (510 aa)
trpBUnannotated protein; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (400 aa)
trpAUnannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (277 aa)
arsCUnannotated protein; Belongs to the ArsC family. (107 aa)
homUnannotated protein. (435 aa)
GCA_900177895_01215Unannotated protein. (226 aa)
GCA_900177895_01072Unannotated protein. (284 aa)
thrBUnannotated protein; Belongs to the pseudomonas-type ThrB family. (311 aa)
spxAUnannotated protein; Belongs to the ArsC family. (117 aa)
serBUnannotated protein. (278 aa)
lpdAUnannotated protein. (593 aa)
sdaAUnannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (456 aa)
GCA_900177895_00510Unannotated protein. (273 aa)
glyA2Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (416 aa)
GCA_900177895_00293Unannotated protein; Belongs to the UPF0237 family. (90 aa)
GCA_900177895_00164Unannotated protein. (595 aa)
gpmA_2Unannotated protein; Belongs to the phosphoglycerate mutase family. (259 aa)
GCA_900177895_00129Unannotated protein. (116 aa)
asdUnannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (370 aa)
hprAUnannotated protein. (86 aa)
GCA_900177895_00110Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (124 aa)
gpmA_1Unannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily. (227 aa)
fldHUnannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (334 aa)
thrCUnannotated protein. (469 aa)
Your Current Organism:
Kingella negevensis
NCBI taxonomy Id: 1522312
Other names: CCUG 69806, CSUR P957, K. negevensis, Kingella negevensis El Houmami et al. 2017, Kingella sp. AA267, Kingella sp. AA503, Kingella sp. BB632, Kingella sp. BB713, Kingella sp. CC132, Kingella sp. CC173_6, Kingella sp. CC505b, Kingella sp. CC546, Kingella sp. CHUV31, Kingella sp. D2292, Kingella sp. D2756, Kingella sp. D7323, Kingella sp. EE451, Kingella sp. EPA009, Kingella sp. EPA014, Kingella sp. PED555, Kingella sp. PVC1712, Kingella sp. PVC1735, Kingella sp. SW7208426, Kingella sp. Sch1437, Kingella sp. Sch538, Kingella sp. Sch690, strain Sch538
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