STRINGSTRING
GCA_900177895_01803 GCA_900177895_01803 vapC_1 vapC_1 aspC aspC GCA_900177895_01911 GCA_900177895_01911 asd asd cysK cysK mdeA mdeA metC metC rsmA rsmA metK metK sdaA sdaA GCA_900177895_00572 GCA_900177895_00572 GCA_900177895_00682 GCA_900177895_00682 tyrB tyrB mmuM mmuM speE_1 speE_1 GCA_900177895_00985 GCA_900177895_00985 GCA_900177895_00988 GCA_900177895_00988 GCA_900177895_01072 GCA_900177895_01072 speE_2 speE_2 gshB gshB GCA_900177895_01149 GCA_900177895_01149 cysE cysE hom hom GCA_900177895_01344 GCA_900177895_01344 speH speH metZ metZ GCA_900177895_01398 GCA_900177895_01398 GCA_900177895_01493 GCA_900177895_01493 serC serC metX metX msrC msrC lysC lysC GCA_900177895_01622 GCA_900177895_01622 ilvE ilvE metE metE luxS luxS mtnN mtnN GCA_900177895_01802 GCA_900177895_01802 GCA_900177895_02052 GCA_900177895_02052 ldhA ldhA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_900177895_01803Unannotated protein. (196 aa)
vapC_1Unannotated protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (133 aa)
aspCUnannotated protein. (397 aa)
GCA_900177895_01911Unannotated protein. (446 aa)
asdUnannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (370 aa)
cysKUnannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. (310 aa)
mdeAUnannotated protein. (424 aa)
metCUnannotated protein. (389 aa)
rsmAUnannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. (259 aa)
metKUnannotated protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. (389 aa)
sdaAUnannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. (456 aa)
GCA_900177895_00572Unannotated protein. (363 aa)
GCA_900177895_00682Unannotated protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (188 aa)
tyrBUnannotated protein. (396 aa)
mmuMUnannotated protein. (293 aa)
speE_1Unannotated protein. (261 aa)
GCA_900177895_00985Unannotated protein. (345 aa)
GCA_900177895_00988Unannotated protein. (328 aa)
GCA_900177895_01072Unannotated protein. (284 aa)
speE_2Unannotated protein; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (556 aa)
gshBUnannotated protein; Belongs to the prokaryotic GSH synthase family. (315 aa)
GCA_900177895_01149Unannotated protein. (669 aa)
cysEUnannotated protein. (272 aa)
homUnannotated protein. (435 aa)
GCA_900177895_01344Unannotated protein. (381 aa)
speHUnannotated protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (122 aa)
metZUnannotated protein; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide. (391 aa)
GCA_900177895_01398Unannotated protein. (96 aa)
GCA_900177895_01493Unannotated protein. (179 aa)
serCUnannotated protein; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (366 aa)
metXUnannotated protein; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. (423 aa)
msrCUnannotated protein. (168 aa)
lysCUnannotated protein; Belongs to the aspartokinase family. (407 aa)
GCA_900177895_01622Unannotated protein. (142 aa)
ilvEUnannotated protein; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (309 aa)
metEUnannotated protein. (363 aa)
luxSUnannotated protein; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family. (159 aa)
mtnNUnannotated protein; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. (239 aa)
GCA_900177895_01802Unannotated protein. (476 aa)
GCA_900177895_02052Unannotated protein. (207 aa)
ldhAUnannotated protein; Catalyzes the conversion of lactate to pyruvate. (319 aa)
Your Current Organism:
Kingella negevensis
NCBI taxonomy Id: 1522312
Other names: CCUG 69806, CSUR P957, K. negevensis, Kingella negevensis El Houmami et al. 2017, Kingella sp. AA267, Kingella sp. AA503, Kingella sp. BB632, Kingella sp. BB713, Kingella sp. CC132, Kingella sp. CC173_6, Kingella sp. CC505b, Kingella sp. CC546, Kingella sp. CHUV31, Kingella sp. D2292, Kingella sp. D2756, Kingella sp. D7323, Kingella sp. EE451, Kingella sp. EPA009, Kingella sp. EPA014, Kingella sp. PED555, Kingella sp. PVC1712, Kingella sp. PVC1735, Kingella sp. SW7208426, Kingella sp. Sch1437, Kingella sp. Sch538, Kingella sp. Sch690, strain Sch538
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