(3 nodes) Domain of unknown function DUF1989 network (Paenibacillus sp. FSLR70273)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIQ46551.1	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
	AIQ46552.1	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	AIQ49344.1	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (207 aa)

Your Current Organism:

Paenibacillus sp. FSLR70273

NCBI taxonomy Id: 1536772
Other names: P. sp. FSL R7-0273, Paenibacillus sp. FSL R7-0273

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIQ46551.1	AIQ46552.1	R70723_12230	R70723_12235	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.857
AIQ46551.1	AIQ49344.1	R70723_12230	R70723_28190	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
AIQ46552.1	AIQ46551.1	R70723_12235	R70723_12230	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.857
AIQ49344.1	AIQ46551.1	R70723_28190	R70723_12230	Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805