(22 nodes) Cytosolic small ribosomal subunit network (Brachypodium distachyon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3EJM2	Uncharacterized protein. (92 aa)
	A0A0Q3KKK7	S10_plectin domain-containing protein. (225 aa)
	A0A0Q3KP17	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (242 aa)
	A0A2K2CLB7	Uncharacterized protein. (92 aa)
	A0A2K2D5E1	Uncharacterized protein. (153 aa)
	I1GM60_BRADI	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	I1GRA1_BRADI	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)
	I1GSB2_BRADI	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (250 aa)
	I1GSG3_BRADI	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (229 aa)
	I1GY20_BRADI	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (137 aa)
	I1H1R3_BRADI	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (226 aa)
	I1H1V2_BRADI	Ribosomal_S10 domain-containing protein. (127 aa)
	I1HB79_BRADI	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (108 aa)
	I1HHU3_BRADI	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (141 aa)
	I1HSX3_BRADI	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (146 aa)
	I1I1X5_BRADI	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (160 aa)
	I1I3N2_BRADI	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (192 aa)
	I1I9H6_BRADI	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (108 aa)
	I1I9J3_BRADI	S10_plectin domain-containing protein. (183 aa)
	I1INP1_BRADI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (149 aa)
	I1IT22_BRADI	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (108 aa)
	I1IUV7_BRADI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (149 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3EJM2	A0A0Q3KKK7	A0A0Q3EJM2	A0A0Q3KKK7	Uncharacterized protein.	S10_plectin domain-containing protein.	0.991
A0A0Q3EJM2	A0A0Q3KP17	A0A0Q3EJM2	A0A0Q3KP17	Uncharacterized protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.993
A0A0Q3EJM2	A0A2K2CLB7	A0A0Q3EJM2	A0A2K2CLB7	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0Q3EJM2	A0A2K2D5E1	A0A0Q3EJM2	A0A2K2D5E1	Uncharacterized protein.	Uncharacterized protein.	0.991
A0A0Q3EJM2	I1GM60_BRADI	A0A0Q3EJM2	I1GM60	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.992
A0A0Q3EJM2	I1GRA1_BRADI	A0A0Q3EJM2	I1GRA1	Uncharacterized protein.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.992
A0A0Q3EJM2	I1GSB2_BRADI	A0A0Q3EJM2	I1GSB2	Uncharacterized protein.	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.	0.986
A0A0Q3EJM2	I1GSG3_BRADI	A0A0Q3EJM2	I1GSG3	Uncharacterized protein.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.987
A0A0Q3EJM2	I1GY20_BRADI	A0A0Q3EJM2	I1GY20	Uncharacterized protein.	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	0.988
A0A0Q3EJM2	I1H1R3_BRADI	A0A0Q3EJM2	I1H1R3	Uncharacterized protein.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.991
A0A0Q3EJM2	I1H1V2_BRADI	A0A0Q3EJM2	I1H1V2	Uncharacterized protein.	Ribosomal_S10 domain-containing protein.	0.995
A0A0Q3EJM2	I1HB79_BRADI	A0A0Q3EJM2	I1HB79	Uncharacterized protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.992
A0A0Q3EJM2	I1HHU3_BRADI	A0A0Q3EJM2	I1HHU3	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.992
A0A0Q3EJM2	I1HSX3_BRADI	A0A0Q3EJM2	I1HSX3	Uncharacterized protein.	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.	0.994
A0A0Q3EJM2	I1I1X5_BRADI	A0A0Q3EJM2	I1I1X5	Uncharacterized protein.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.991
A0A0Q3EJM2	I1I3N2_BRADI	A0A0Q3EJM2	I1I3N2	Uncharacterized protein.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.993
A0A0Q3EJM2	I1I9H6_BRADI	A0A0Q3EJM2	I1I9H6	Uncharacterized protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.991
A0A0Q3EJM2	I1I9J3_BRADI	A0A0Q3EJM2	I1I9J3	Uncharacterized protein.	S10_plectin domain-containing protein.	0.991
A0A0Q3EJM2	I1INP1_BRADI	A0A0Q3EJM2	I1INP1	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.994
A0A0Q3EJM2	I1IT22_BRADI	A0A0Q3EJM2	I1IT22	Uncharacterized protein.	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.	0.991