(10 nodes) Mixed, incl. Glycosyltransferase-like KOBITO 1, and Glycosyltransferase BC10-like network (Brachypodium distachyon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3GN68	Uncharacterized protein. (365 aa)
	A0A0Q3HCX8	BHLH domain-containing protein. (262 aa)
	A0A2K2CF80	Uncharacterized protein. (118 aa)
	A0A2K2DER0	RING-CH-type domain-containing protein. (180 aa)
	I1GNP2_BRADI	Uncharacterized protein. (388 aa)
	I1H6S0_BRADI	Uncharacterized protein. (222 aa)
	I1HDL2_BRADI	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family. (538 aa)
	I1HWW6_BRADI	BZIP domain-containing protein. (193 aa)
	I1I961_BRADI	BHLH domain-containing protein. (293 aa)
	I1IKB3_BRADI	MATH domain-containing protein. (179 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3GN68	A0A2K2CF80	A0A0Q3GN68	A0A2K2CF80	Uncharacterized protein.	Uncharacterized protein.	0.433
A0A0Q3GN68	I1H6S0_BRADI	A0A0Q3GN68	I1H6S0	Uncharacterized protein.	Uncharacterized protein.	0.426
A0A0Q3GN68	I1HDL2_BRADI	A0A0Q3GN68	I1HDL2	Uncharacterized protein.	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.	0.423
A0A0Q3HCX8	A0A2K2CF80	A0A0Q3HCX8	A0A2K2CF80	BHLH domain-containing protein.	Uncharacterized protein.	0.513
A0A0Q3HCX8	I1H6S0_BRADI	A0A0Q3HCX8	I1H6S0	BHLH domain-containing protein.	Uncharacterized protein.	0.469
A0A0Q3HCX8	I1HDL2_BRADI	A0A0Q3HCX8	I1HDL2	BHLH domain-containing protein.	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.	0.406
A0A0Q3HCX8	I1HWW6_BRADI	A0A0Q3HCX8	I1HWW6	BHLH domain-containing protein.	BZIP domain-containing protein.	0.510
A0A0Q3HCX8	I1IKB3_BRADI	A0A0Q3HCX8	I1IKB3	BHLH domain-containing protein.	MATH domain-containing protein.	0.530
A0A2K2CF80	A0A0Q3GN68	A0A2K2CF80	A0A0Q3GN68	Uncharacterized protein.	Uncharacterized protein.	0.433
A0A2K2CF80	A0A0Q3HCX8	A0A2K2CF80	A0A0Q3HCX8	Uncharacterized protein.	BHLH domain-containing protein.	0.513
A0A2K2CF80	I1GNP2_BRADI	A0A2K2CF80	I1GNP2	Uncharacterized protein.	Uncharacterized protein.	0.411
A0A2K2CF80	I1H6S0_BRADI	A0A2K2CF80	I1H6S0	Uncharacterized protein.	Uncharacterized protein.	0.473
A0A2K2CF80	I1HDL2_BRADI	A0A2K2CF80	I1HDL2	Uncharacterized protein.	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.	0.433
A0A2K2CF80	I1HWW6_BRADI	A0A2K2CF80	I1HWW6	Uncharacterized protein.	BZIP domain-containing protein.	0.474
A0A2K2CF80	I1IKB3_BRADI	A0A2K2CF80	I1IKB3	Uncharacterized protein.	MATH domain-containing protein.	0.531
A0A2K2DER0	I1H6S0_BRADI	A0A2K2DER0	I1H6S0	RING-CH-type domain-containing protein.	Uncharacterized protein.	0.458
A0A2K2DER0	I1HWW6_BRADI	A0A2K2DER0	I1HWW6	RING-CH-type domain-containing protein.	BZIP domain-containing protein.	0.415
A0A2K2DER0	I1IKB3_BRADI	A0A2K2DER0	I1IKB3	RING-CH-type domain-containing protein.	MATH domain-containing protein.	0.448
I1GNP2_BRADI	A0A2K2CF80	I1GNP2	A0A2K2CF80	Uncharacterized protein.	Uncharacterized protein.	0.411
I1GNP2_BRADI	I1HDL2_BRADI	I1GNP2	I1HDL2	Uncharacterized protein.	Glycosyltransferase family 92 protein; Belongs to the glycosyltransferase 92 family.	0.408