STRINGSTRING
A0A0Q3EM86 A0A0Q3EM86 A0A0Q3FA95 A0A0Q3FA95 A0A0Q3FZE4 A0A0Q3FZE4 A0A0Q3H702 A0A0Q3H702 A0A0Q3H9X2 A0A0Q3H9X2 A0A0Q3HE10 A0A0Q3HE10 A0A0Q3IDE8 A0A0Q3IDE8 A0A0Q3IER1 A0A0Q3IER1 A0A0Q3IGP9 A0A0Q3IGP9 A0A0Q3J3E4 A0A0Q3J3E4 A0A0Q3J3I1 A0A0Q3J3I1 A0A0Q3J566 A0A0Q3J566 A0A0Q3JHC4 A0A0Q3JHC4 A0A0Q3NY79 A0A0Q3NY79 A0A0Q3RGZ0 A0A0Q3RGZ0 A0A0Q3S5L5 A0A0Q3S5L5 A0A0Q3S6F6 A0A0Q3S6F6 A0A2K2CJL8 A0A2K2CJL8 A0A2K2CUU2 A0A2K2CUU2 A0A2K2DIX7 A0A2K2DIX7 I1GKT4_BRADI I1GKT4_BRADI I1GKU0_BRADI I1GKU0_BRADI I1GP51_BRADI I1GP51_BRADI I1GSG1_BRADI I1GSG1_BRADI I1GVN5_BRADI I1GVN5_BRADI I1GVQ2_BRADI I1GVQ2_BRADI I1GXF6_BRADI I1GXF6_BRADI I1H4G5_BRADI I1H4G5_BRADI I1H5E6_BRADI I1H5E6_BRADI I1H646_BRADI I1H646_BRADI I1H669_BRADI I1H669_BRADI I1H6D9_BRADI I1H6D9_BRADI I1H772_BRADI I1H772_BRADI I1H8P4_BRADI I1H8P4_BRADI I1H9K2_BRADI I1H9K2_BRADI I1HE26_BRADI I1HE26_BRADI I1HE91_BRADI I1HE91_BRADI I1HE92_BRADI I1HE92_BRADI I1HFQ8_BRADI I1HFQ8_BRADI I1HH19_BRADI I1HH19_BRADI I1HHS5_BRADI I1HHS5_BRADI I1HJW2_BRADI I1HJW2_BRADI I1HKG6_BRADI I1HKG6_BRADI I1HLM8_BRADI I1HLM8_BRADI I1HNZ5_BRADI I1HNZ5_BRADI I1HSC6_BRADI I1HSC6_BRADI I1HTR1_BRADI I1HTR1_BRADI I1HTX3_BRADI I1HTX3_BRADI I1HVB0_BRADI I1HVB0_BRADI I1HVJ4_BRADI I1HVJ4_BRADI I1HVN1_BRADI I1HVN1_BRADI I1HW00_BRADI I1HW00_BRADI I1HW70_BRADI I1HW70_BRADI I1HWR8_BRADI I1HWR8_BRADI I1HX09_BRADI I1HX09_BRADI I1HX53_BRADI I1HX53_BRADI I1HXV4_BRADI I1HXV4_BRADI I1HZD7_BRADI I1HZD7_BRADI I1I0G3_BRADI I1I0G3_BRADI I1I1J6_BRADI I1I1J6_BRADI I1I1N0_BRADI I1I1N0_BRADI I1I4F0_BRADI I1I4F0_BRADI I1I537_BRADI I1I537_BRADI I1I9Y0_BRADI I1I9Y0_BRADI I1IAP4_BRADI I1IAP4_BRADI I1IB12_BRADI I1IB12_BRADI I1IEF7_BRADI I1IEF7_BRADI I1IEX6_BRADI I1IEX6_BRADI I1IFK6_BRADI I1IFK6_BRADI I1INV4_BRADI I1INV4_BRADI I1IPR7_BRADI I1IPR7_BRADI I1IPV9_BRADI I1IPV9_BRADI I1IRS8_BRADI I1IRS8_BRADI I1IX44_BRADI I1IX44_BRADI I1IY34_BRADI I1IY34_BRADI I1IYP8_BRADI I1IYP8_BRADI I1IYQ1_BRADI I1IYQ1_BRADI I1IZ93_BRADI I1IZ93_BRADI I1J2B4_BRADI I1J2B4_BRADI I1J302_BRADI I1J302_BRADI I1J3M7_BRADI I1J3M7_BRADI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0Q3EM86Uncharacterized protein. (180 aa)
A0A0Q3FA95Sm domain-containing protein. (251 aa)
A0A0Q3FZE4Uncharacterized protein; Belongs to the DEAD box helicase family. (606 aa)
A0A0Q3H702Uncharacterized protein. (1968 aa)
A0A0Q3H9X2MPN domain-containing protein. (2357 aa)
A0A0Q3HE10Nop domain-containing protein. (532 aa)
A0A0Q3IDE8Uncharacterized protein. (76 aa)
A0A0Q3IER1Uncharacterized protein. (124 aa)
A0A0Q3IGP9Uncharacterized protein. (97 aa)
A0A0Q3J3E4Uncharacterized protein. (257 aa)
A0A0Q3J3I1RRM domain-containing protein. (127 aa)
A0A0Q3J566WD_REPEATS_REGION domain-containing protein. (237 aa)
A0A0Q3JHC4Uncharacterized protein. (631 aa)
A0A0Q3NY79Sm domain-containing protein. (99 aa)
A0A0Q3RGZ0RRM domain-containing protein. (175 aa)
A0A0Q3S5L5CPSF_A domain-containing protein. (1357 aa)
A0A0Q3S6F6Small nuclear ribonucleoprotein-associated protein. (263 aa)
A0A2K2CJL8Uncharacterized protein. (192 aa)
A0A2K2CUU2Uncharacterized protein. (767 aa)
A0A2K2DIX7Uncharacterized protein. (192 aa)
I1GKT4_BRADIWD_REPEATS_REGION domain-containing protein. (540 aa)
I1GKU0_BRADIUncharacterized protein. (283 aa)
I1GP51_BRADIUncharacterized protein; Belongs to the DEAD box helicase family. (734 aa)
I1GSG1_BRADISmall nuclear ribonucleoprotein G. (80 aa)
I1GVN5_BRADIWD_REPEATS_REGION domain-containing protein. (344 aa)
I1GVQ2_BRADISm domain-containing protein. (86 aa)
I1GXF6_BRADITr-type G domain-containing protein. (995 aa)
I1H4G5_BRADITOG domain-containing protein. (1276 aa)
I1H5E6_BRADIWD_REPEATS_REGION domain-containing protein. (509 aa)
I1H646_BRADIUncharacterized protein. (719 aa)
I1H669_BRADIUncharacterized protein; Belongs to the DEAD box helicase family. (767 aa)
I1H6D9_BRADIUncharacterized protein. (233 aa)
I1H772_BRADIMatrin-type domain-containing protein. (320 aa)
I1H8P4_BRADISplicing factor subunit; Belongs to the SF3B5 family. (87 aa)
I1H9K2_BRADIUncharacterized protein. (380 aa)
I1HE26_BRADIU6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (142 aa)
I1HE91_BRADISURP motif domain-containing protein. (147 aa)
I1HE92_BRADIUncharacterized protein. (787 aa)
I1HFQ8_BRADIU6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (99 aa)
I1HH19_BRADIUncharacterized protein. (455 aa)
I1HHS5_BRADIUncharacterized protein. (142 aa)
I1HJW2_BRADIU6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (89 aa)
I1HKG6_BRADIUncharacterized protein. (171 aa)
I1HLM8_BRADIUncharacterized protein. (251 aa)
I1HNZ5_BRADIUncharacterized protein. (1075 aa)
I1HSC6_BRADIUncharacterized protein. (58 aa)
I1HTR1_BRADIU6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
I1HTX3_BRADIRRM domain-containing protein. (205 aa)
I1HVB0_BRADIUncharacterized protein. (142 aa)
I1HVJ4_BRADISmall nuclear ribonucleoprotein Sm D2. (106 aa)
I1HVN1_BRADIUncharacterized protein. (142 aa)
I1HW00_BRADISmall nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (134 aa)
I1HW70_BRADIUncharacterized protein. (2179 aa)
I1HWR8_BRADISmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
I1HX09_BRADICPSF_A domain-containing protein. (1228 aa)
I1HX53_BRADITOG domain-containing protein. (1279 aa)
I1HXV4_BRADISm domain-containing protein. (86 aa)
I1HZD7_BRADIU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (211 aa)
I1I0G3_BRADIRRM domain-containing protein. (833 aa)
I1I1J6_BRADISm-like protein LSM2; Component of LSM protein complexes, which are involved in RNA processing. (93 aa)
I1I1N0_BRADISmall nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
I1I4F0_BRADIUncharacterized protein. (359 aa)
I1I537_BRADIUncharacterized protein. (960 aa)
I1I9Y0_BRADISm domain-containing protein. (98 aa)
I1IAP4_BRADIU6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
I1IB12_BRADISmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
I1IEF7_BRADIPSP domain-containing protein. (572 aa)
I1IEX6_BRADIMatrin-type domain-containing protein. (507 aa)
I1IFK6_BRADIUncharacterized protein. (820 aa)
I1INV4_BRADIDEAD domain-containing protein. (521 aa)
I1IPR7_BRADIOCRE domain-containing protein. (406 aa)
I1IPV9_BRADIUncharacterized protein. (569 aa)
I1IRS8_BRADISmall nuclear ribonucleoprotein G. (81 aa)
I1IX44_BRADISm domain-containing protein. (97 aa)
I1IY34_BRADIU6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. (128 aa)
I1IYP8_BRADIUncharacterized protein. (57 aa)
I1IYQ1_BRADISmall nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. (114 aa)
I1IZ93_BRADIUncharacterized protein. (489 aa)
I1J2B4_BRADISm domain-containing protein. (100 aa)
I1J302_BRADIUncharacterized protein. (110 aa)
I1J3M7_BRADIUncharacterized protein. (142 aa)
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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