(25 nodes) Processing of Intronless Pre-mRNAs, and COMPASS component Swd2/WDR82 network (Brachypodium distachyon)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3EIL3	TPR_REGION domain-containing protein. (780 aa)
	A0A0Q3ESF0	RRM domain-containing protein. (478 aa)
	A0A0Q3EYM6	Cleavage and polyadenylation specificity factor subunit 2. (739 aa)
	A0A0Q3GLS3	Uncharacterized protein. (768 aa)
	A0A0Q3HTD1	CID domain-containing protein. (1029 aa)
	A0A0Q3PFS7	Uncharacterized protein. (137 aa)
	A0A0Q3R7M4	Uncharacterized protein. (1383 aa)
	A0A2K2CNS0	WD_REPEATS_REGION domain-containing protein. (335 aa)
	A0A2K2CVW8	Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily. (522 aa)
	A0A2K2D6B7	Cleavage and polyadenylation specificity factor subunit 2. (739 aa)
	A0A2K2DKZ9	Uncharacterized protein. (99 aa)
	A0A2K2DTY0	Uncharacterized protein. (178 aa)
	I1GKQ1_BRADI	Uncharacterized protein. (690 aa)
	I1GN67_BRADI	WD_REPEATS_REGION domain-containing protein. (428 aa)
	I1GNU2_BRADI	Fip1 domain-containing protein. (1280 aa)
	I1GQU5_BRADI	Uncharacterized protein. (130 aa)
	I1GQU7_BRADI	Uncharacterized protein. (1254 aa)
	I1GW41_BRADI	Uncharacterized protein. (653 aa)
	I1GWL0_BRADI	RRM domain-containing protein. (222 aa)
	I1HGZ0_BRADI	WD_REPEATS_REGION domain-containing protein. (320 aa)
	I1HV81_BRADI	WD_REPEATS_REGION domain-containing protein. (722 aa)
	I1I116_BRADI	CID domain-containing protein. (936 aa)
	I1IAB6_BRADI	Myb-like domain-containing protein. (875 aa)
	I1IU22_BRADI	Uncharacterized protein. (198 aa)
	I1IWJ9_BRADI	CPSF_A domain-containing protein. (1442 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3EIL3	A0A0Q3ESF0	A0A0Q3EIL3	A0A0Q3ESF0	TPR_REGION domain-containing protein.	RRM domain-containing protein.	0.987
A0A0Q3EIL3	A0A0Q3EYM6	A0A0Q3EIL3	A0A0Q3EYM6	TPR_REGION domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.937
A0A0Q3EIL3	A0A0Q3GLS3	A0A0Q3EIL3	A0A0Q3GLS3	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.941
A0A0Q3EIL3	A0A0Q3HTD1	A0A0Q3EIL3	A0A0Q3HTD1	TPR_REGION domain-containing protein.	CID domain-containing protein.	0.984
A0A0Q3EIL3	A0A0Q3PFS7	A0A0Q3EIL3	A0A0Q3PFS7	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.988
A0A0Q3EIL3	A0A0Q3R7M4	A0A0Q3EIL3	A0A0Q3R7M4	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.955
A0A0Q3EIL3	A0A2K2CNS0	A0A0Q3EIL3	A0A2K2CNS0	TPR_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.621
A0A0Q3EIL3	A0A2K2CVW8	A0A0Q3EIL3	A0A2K2CVW8	TPR_REGION domain-containing protein.	Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.	0.976
A0A0Q3EIL3	A0A2K2D6B7	A0A0Q3EIL3	A0A2K2D6B7	TPR_REGION domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.937
A0A0Q3EIL3	A0A2K2DKZ9	A0A0Q3EIL3	A0A2K2DKZ9	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.939
A0A0Q3EIL3	A0A2K2DTY0	A0A0Q3EIL3	A0A2K2DTY0	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.963
A0A0Q3EIL3	I1GKQ1_BRADI	A0A0Q3EIL3	I1GKQ1	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.941
A0A0Q3EIL3	I1GN67_BRADI	A0A0Q3EIL3	I1GN67	TPR_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.994
A0A0Q3EIL3	I1GNU2_BRADI	A0A0Q3EIL3	I1GNU2	TPR_REGION domain-containing protein.	Fip1 domain-containing protein.	0.994
A0A0Q3EIL3	I1GQU5_BRADI	A0A0Q3EIL3	I1GQU5	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.951
A0A0Q3EIL3	I1GQU7_BRADI	A0A0Q3EIL3	I1GQU7	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.951
A0A0Q3EIL3	I1GW41_BRADI	A0A0Q3EIL3	I1GW41	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.993
A0A0Q3EIL3	I1GWL0_BRADI	A0A0Q3EIL3	I1GWL0	TPR_REGION domain-containing protein.	RRM domain-containing protein.	0.997
A0A0Q3EIL3	I1HGZ0_BRADI	A0A0Q3EIL3	I1HGZ0	TPR_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.621
A0A0Q3EIL3	I1HV81_BRADI	A0A0Q3EIL3	I1HV81	TPR_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.991