(15 nodes) Mature ribosome assembly network (Brachypodium distachyon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1GRV5_BRADI	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
	I1HBX1_BRADI	Uncharacterized protein. (256 aa)
	I1HBX3_BRADI	Uncharacterized protein. (272 aa)
	I1HCM7_BRADI	Uncharacterized protein. (320 aa)
	I1HEL2_BRADI	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (246 aa)
	I1HIT7_BRADI	Uncharacterized protein. (251 aa)
	I1HL89_BRADI	Uncharacterized protein. (310 aa)
	I1HS30_BRADI	Uncharacterized protein. (245 aa)
	I1I7F3_BRADI	Uncharacterized protein. (228 aa)
	I1ISQ4_BRADI	Uncharacterized protein. (224 aa)
	I1J1Q3_BRADI	Uncharacterized protein. (361 aa)
	A0A2K2CVV0	Uncharacterized protein. (337 aa)
	I1GYQ6_BRADI	Uncharacterized protein. (266 aa)
	A0A2K2DHD7	Tr-type G domain-containing protein. (1011 aa)
	I1GPY0_BRADI	Tr-type G domain-containing protein. (1048 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2K2DHD7	I1GRV5_BRADI	A0A2K2DHD7	I1GRV5	Tr-type G domain-containing protein.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.683
A0A2K2DHD7	I1HEL2_BRADI	A0A2K2DHD7	I1HEL2	Tr-type G domain-containing protein.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.683
A0A2K2DHD7	I1J1Q3_BRADI	A0A2K2DHD7	I1J1Q3	Tr-type G domain-containing protein.	Uncharacterized protein.	0.964
I1GPY0_BRADI	I1GRV5_BRADI	I1GPY0	I1GRV5	Tr-type G domain-containing protein.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.683
I1GPY0_BRADI	I1HEL2_BRADI	I1GPY0	I1HEL2	Tr-type G domain-containing protein.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.683
I1GPY0_BRADI	I1J1Q3_BRADI	I1GPY0	I1J1Q3	Tr-type G domain-containing protein.	Uncharacterized protein.	0.964
I1GRV5_BRADI	A0A2K2DHD7	I1GRV5	A0A2K2DHD7	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Tr-type G domain-containing protein.	0.683
I1GRV5_BRADI	I1GPY0_BRADI	I1GRV5	I1GPY0	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Tr-type G domain-containing protein.	0.683
I1GRV5_BRADI	I1HEL2_BRADI	I1GRV5	I1HEL2	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.900
I1GRV5_BRADI	I1J1Q3_BRADI	I1GRV5	I1J1Q3	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Uncharacterized protein.	0.977
I1HEL2_BRADI	A0A2K2DHD7	I1HEL2	A0A2K2DHD7	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Tr-type G domain-containing protein.	0.683
I1HEL2_BRADI	I1GPY0_BRADI	I1HEL2	I1GPY0	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Tr-type G domain-containing protein.	0.683
I1HEL2_BRADI	I1GRV5_BRADI	I1HEL2	I1GRV5	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.900
I1HEL2_BRADI	I1J1Q3_BRADI	I1HEL2	I1J1Q3	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	Uncharacterized protein.	0.977
I1J1Q3_BRADI	A0A2K2DHD7	I1J1Q3	A0A2K2DHD7	Uncharacterized protein.	Tr-type G domain-containing protein.	0.964
I1J1Q3_BRADI	I1GPY0_BRADI	I1J1Q3	I1GPY0	Uncharacterized protein.	Tr-type G domain-containing protein.	0.964
I1J1Q3_BRADI	I1GRV5_BRADI	I1J1Q3	I1GRV5	Uncharacterized protein.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.977
I1J1Q3_BRADI	I1HEL2_BRADI	I1J1Q3	I1HEL2	Uncharacterized protein.	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.	0.977