(9 nodes) Farnesyl diphosphate biosynthetic process network (Brachypodium distachyon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1HDW0_BRADI	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (383 aa)
	I1J2U5_BRADI	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (401 aa)
	I1I969_BRADI	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (467 aa)
	I1HQR4_BRADI	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (353 aa)
	I1HQM7_BRADI	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (347 aa)
	I1HGY9_BRADI	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (352 aa)
	I1HAG2_BRADI	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase. (463 aa)
	I1H7D5_BRADI	Uncharacterized protein. (512 aa)
	I1GT09_BRADI	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (356 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1GT09_BRADI	I1H7D5_BRADI	I1GT09	I1H7D5	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.480
I1GT09_BRADI	I1HAG2_BRADI	I1GT09	I1HAG2	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.418
I1GT09_BRADI	I1HDW0_BRADI	I1GT09	I1HDW0	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.904
I1GT09_BRADI	I1HGY9_BRADI	I1GT09	I1HGY9	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.944
I1GT09_BRADI	I1HQM7_BRADI	I1GT09	I1HQM7	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.470
I1GT09_BRADI	I1HQR4_BRADI	I1GT09	I1HQR4	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.944
I1GT09_BRADI	I1I969_BRADI	I1GT09	I1I969	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.418
I1GT09_BRADI	I1J2U5_BRADI	I1GT09	I1J2U5	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.944
I1H7D5_BRADI	I1GT09_BRADI	I1H7D5	I1GT09	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.480
I1H7D5_BRADI	I1HAG2_BRADI	I1H7D5	I1HAG2	Uncharacterized protein.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.570
I1H7D5_BRADI	I1HGY9_BRADI	I1H7D5	I1HGY9	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.679
I1H7D5_BRADI	I1HQR4_BRADI	I1H7D5	I1HQR4	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.679
I1H7D5_BRADI	I1I969_BRADI	I1H7D5	I1I969	Uncharacterized protein.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.570
I1HAG2_BRADI	I1GT09_BRADI	I1HAG2	I1GT09	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.418
I1HAG2_BRADI	I1H7D5_BRADI	I1HAG2	I1H7D5	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein.	0.570
I1HAG2_BRADI	I1HDW0_BRADI	I1HAG2	I1HDW0	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.418
I1HAG2_BRADI	I1HGY9_BRADI	I1HAG2	I1HGY9	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.493
I1HAG2_BRADI	I1HQM7_BRADI	I1HAG2	I1HQM7	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.494
I1HAG2_BRADI	I1HQR4_BRADI	I1HAG2	I1HQR4	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.493
I1HAG2_BRADI	I1I969_BRADI	I1HAG2	I1I969	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.	0.901