6 items (Brachypodium distachyon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1HKF7_BRADI	Uncharacterized protein. (1014 aa)
	I1GLX4_BRADI	Uncharacterized protein. (291 aa)
	I1GPB2_BRADI	N-acetyltransferase domain-containing protein. (174 aa)
	I1GT74_BRADI	Uncharacterized protein. (286 aa)
	I1H2S0_BRADI	Uncharacterized protein. (299 aa)
	I1HPF5_BRADI	Uncharacterized protein. (907 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
I1GLX4_BRADI	I1HKF7_BRADI	I1GLX4	I1HKF7	Uncharacterized protein.	Uncharacterized protein.	0.879
I1GLX4_BRADI	I1HPF5_BRADI	I1GLX4	I1HPF5	Uncharacterized protein.	Uncharacterized protein.	0.432
I1GPB2_BRADI	I1HKF7_BRADI	I1GPB2	I1HKF7	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.956
I1GPB2_BRADI	I1HPF5_BRADI	I1GPB2	I1HPF5	N-acetyltransferase domain-containing protein.	Uncharacterized protein.	0.483
I1GT74_BRADI	I1HKF7_BRADI	I1GT74	I1HKF7	Uncharacterized protein.	Uncharacterized protein.	0.879
I1GT74_BRADI	I1HPF5_BRADI	I1GT74	I1HPF5	Uncharacterized protein.	Uncharacterized protein.	0.432
I1H2S0_BRADI	I1HKF7_BRADI	I1H2S0	I1HKF7	Uncharacterized protein.	Uncharacterized protein.	0.879
I1H2S0_BRADI	I1HPF5_BRADI	I1H2S0	I1HPF5	Uncharacterized protein.	Uncharacterized protein.	0.432
I1HKF7_BRADI	I1GLX4_BRADI	I1HKF7	I1GLX4	Uncharacterized protein.	Uncharacterized protein.	0.879
I1HKF7_BRADI	I1GPB2_BRADI	I1HKF7	I1GPB2	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.956
I1HKF7_BRADI	I1GT74_BRADI	I1HKF7	I1GT74	Uncharacterized protein.	Uncharacterized protein.	0.879
I1HKF7_BRADI	I1H2S0_BRADI	I1HKF7	I1H2S0	Uncharacterized protein.	Uncharacterized protein.	0.879
I1HKF7_BRADI	I1HPF5_BRADI	I1HKF7	I1HPF5	Uncharacterized protein.	Uncharacterized protein.	0.751
I1HPF5_BRADI	I1GLX4_BRADI	I1HPF5	I1GLX4	Uncharacterized protein.	Uncharacterized protein.	0.432
I1HPF5_BRADI	I1GPB2_BRADI	I1HPF5	I1GPB2	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.483
I1HPF5_BRADI	I1GT74_BRADI	I1HPF5	I1GT74	Uncharacterized protein.	Uncharacterized protein.	0.432
I1HPF5_BRADI	I1H2S0_BRADI	I1HPF5	I1H2S0	Uncharacterized protein.	Uncharacterized protein.	0.432
I1HPF5_BRADI	I1HKF7_BRADI	I1HPF5	I1HKF7	Uncharacterized protein.	Uncharacterized protein.	0.751