(86 nodes) Ubiquitin-like domain network (Brachypodium distachyon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3IE72	Ubiquitin-like domain-containing protein. (143 aa)
	A0A0Q3IUT3	Ubiquitin-like domain-containing protein. (142 aa)
	A0A0Q3JCB5	Ubiquitin-like domain-containing protein. (109 aa)
	A0A0Q3JQN3	Uncharacterized protein. (265 aa)
	I1J3U6_BRADI	CAP-Gly domain-containing protein. (249 aa)
	I1J2H9_BRADI	Uncharacterized protein. (577 aa)
	I1J1X7_BRADI	Ubiquitin-like domain-containing protein. (266 aa)
	I1IYZ2_BRADI	Ubiquitin-like domain-containing protein. (161 aa)
	I1IX64_BRADI	Membrane-anchored ubiquitin-fold protein; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (137 aa)
	I1IUI1_BRADI	Ubiquitin-like domain-containing protein. (73 aa)
	I1IT17_BRADI	Ubiquitin-like domain-containing protein. (129 aa)
	I1IS06_BRADI	Uncharacterized protein. (332 aa)
	I1IR52_BRADI	Ubiquitin-like domain-containing protein. (187 aa)
	I1IQH1_BRADI	Ubiquitin-like domain-containing protein. (219 aa)
	I1IQ69_BRADI	Uncharacterized protein. (153 aa)
	I1IPZ9_BRADI	Uncharacterized protein. (395 aa)
	I1IPJ0_BRADI	Uncharacterized protein. (134 aa)
	I1IK75_BRADI	Uncharacterized protein. (224 aa)
	I1IJG2_BRADI	Uncharacterized protein. (153 aa)
	I1IF72_BRADI	Membrane-anchored ubiquitin-fold protein; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (119 aa)
	I1IBS6_BRADI	Ubiquitin-like domain-containing protein. (73 aa)
	I1IB82_BRADI	Ubiquitin-like domain-containing protein. (165 aa)
	I1I974_BRADI	Ubiquitin-like domain-containing protein. (322 aa)
	I1I788_BRADI	Uncharacterized protein. (395 aa)
	I1I505_BRADI	Ubiquitin-like domain-containing protein. (158 aa)
	I1I4N3_BRADI	Uncharacterized protein. (340 aa)
	I1I4E3_BRADI	Ubiquitin-like domain-containing protein. (373 aa)
	I1I2N5_BRADI	Ubiquitin-like domain-containing protein. (693 aa)
	I1I120_BRADI	Uncharacterized protein. (229 aa)
	A0A0Q3KYB0	Ubiquitin-like domain-containing protein. (164 aa)
	A0A0Q3L1C9	Ubiquitin-like domain-containing protein. (132 aa)
	A0A0Q3L922	Uncharacterized protein. (353 aa)
	A0A0Q3MWG9	Rad60-SLD domain-containing protein. (260 aa)
	A0A0Q3N351	Ubiquitin-like domain-containing protein. (177 aa)
	A0A0Q3NE89	Ubiquitin-like domain-containing protein. (101 aa)
	A0A0Q3RPM1	Ubiquitin-like domain-containing protein. (148 aa)
	A0A0Q3RRB9	Ubiquitin-like domain-containing protein. (114 aa)
	A0A2K2CFR3	Ubiquitin-like domain-containing protein. (98 aa)
	A0A2K2CLT5	Uncharacterized protein. (311 aa)
	A0A2K2CS22	Uncharacterized protein. (838 aa)
	A0A2K2CT96	Uncharacterized protein. (224 aa)
	A0A2K2CUG9	Uncharacterized protein. (515 aa)
	A0A2K2DCL6	Ubiquitin-like domain-containing protein. (162 aa)
	A0A2K2DD24	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family. (525 aa)
	A0A2K2DG79	Uncharacterized protein. (412 aa)
	A0A2K2DKT6	Ubiquitin-like domain-containing protein. (295 aa)
	A0A2K2DM32	Uncharacterized protein. (1827 aa)
	A0A2K2DMS4	Uncharacterized protein. (270 aa)
	A0A2K2DP94	Uncharacterized protein. (413 aa)
	A0A2K2DQJ9	Uncharacterized protein. (256 aa)
	A0A2K2DTV5	Ubiquitin-like domain-containing protein. (132 aa)
	I1HF45_BRADI	Ubiquitin-like domain-containing protein. (139 aa)
	I1HFE5_BRADI	Uncharacterized protein. (415 aa)
	I1HK96_BRADI	Ubiquitin-like domain-containing protein. (139 aa)
	I1HLI1_BRADI	Ubiquitin-like domain-containing protein. (155 aa)
	I1HT22_BRADI	Uncharacterized protein. (259 aa)
	I1HTG1_BRADI	Ubiquitin-like domain-containing protein. (120 aa)
	I1HUL5_BRADI	Small ubiquitin-related modifier. (104 aa)
	I1HXX4_BRADI	Uncharacterized protein. (368 aa)
	I1HYF1_BRADI	Uncharacterized protein. (410 aa)
	I1HZM7_BRADI	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (563 aa)
	A0A2K2DTV6	Ubiquitin-like domain-containing protein. (235 aa)
	A0A2K2DU07	Ubiquitin-like domain-containing protein. (213 aa)
	A0A2K2DU14	Ubiquitin-like domain-containing protein. (261 aa)
	A0A2K2DU68	Uncharacterized protein. (695 aa)
	A0A2K2DVK3	Ubiquitin-like domain-containing protein. (509 aa)
	A0A2K2DVN9	Uncharacterized protein. (270 aa)
	I1GN00_BRADI	Uncharacterized protein; Belongs to the peptidase C19 family. (1074 aa)
	I1GT45_BRADI	Rad60-SLD domain-containing protein. (167 aa)
	I1GVK9_BRADI	Uncharacterized protein. (153 aa)
	UBQ10	Polyubiquitin 10. (381 aa)
	I1GZM1_BRADI	Membrane-anchored ubiquitin-fold protein; May serve as docking site to facilitate the association of other proteins to the plasma membrane. (118 aa)
	I1H3C7_BRADI	Uncharacterized protein. (151 aa)
	A0A0Q3ET82	Uncharacterized protein. (852 aa)
	A0A0Q3EHV0	Uncharacterized protein. (227 aa)
	A0A0Q3F1A8	Uncharacterized protein. (341 aa)
	A0A0Q3FQE5	Uncharacterized protein. (651 aa)
	A0A0Q3GX22	Ubiquitin-like domain-containing protein. (104 aa)
	I1H6Z4_BRADI	Uncharacterized protein. (693 aa)
	I1HA42_BRADI	Uncharacterized protein. (532 aa)
	I1HA43_BRADI	Uncharacterized protein. (534 aa)
	I1HAE8_BRADI	Ubiquitin-like domain-containing protein. (460 aa)
	I1HE92_BRADI	Uncharacterized protein. (787 aa)
	I1HF29_BRADI	Ubiquitin-like domain-containing protein. (155 aa)
	A0A0Q3H185	Ubiquitin-like domain-containing protein. (973 aa)
	A0A0Q3H1Q2	Uncharacterized protein. (172 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3EHV0	A0A0Q3ET82	A0A0Q3EHV0	A0A0Q3ET82	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A0Q3EHV0	A0A0Q3IE72	A0A0Q3EHV0	A0A0Q3IE72	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.566
A0A0Q3EHV0	A0A0Q3IUT3	A0A0Q3EHV0	A0A0Q3IUT3	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.566
A0A0Q3EHV0	A0A0Q3KYB0	A0A0Q3EHV0	A0A0Q3KYB0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.566
A0A0Q3EHV0	A0A0Q3RPM1	A0A0Q3EHV0	A0A0Q3RPM1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.452
A0A0Q3EHV0	A0A2K2CFR3	A0A0Q3EHV0	A0A2K2CFR3	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.588
A0A0Q3EHV0	A0A2K2CS22	A0A0Q3EHV0	A0A2K2CS22	Uncharacterized protein.	Uncharacterized protein.	0.532
A0A0Q3EHV0	A0A2K2CUG9	A0A0Q3EHV0	A0A2K2CUG9	Uncharacterized protein.	Uncharacterized protein.	0.641
A0A0Q3EHV0	A0A2K2DCL6	A0A0Q3EHV0	A0A2K2DCL6	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.566
A0A0Q3EHV0	A0A2K2DD24	A0A0Q3EHV0	A0A2K2DD24	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.	0.481
A0A0Q3EHV0	A0A2K2DP94	A0A0Q3EHV0	A0A2K2DP94	Uncharacterized protein.	Uncharacterized protein.	0.522
A0A0Q3EHV0	A0A2K2DTV5	A0A0Q3EHV0	A0A2K2DTV5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.566
A0A0Q3EHV0	A0A2K2DTV6	A0A0Q3EHV0	A0A2K2DTV6	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.597
A0A0Q3EHV0	I1GN00_BRADI	A0A0Q3EHV0	I1GN00	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.504
A0A0Q3EHV0	I1HA42_BRADI	A0A0Q3EHV0	I1HA42	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A0Q3EHV0	I1HA43_BRADI	A0A0Q3EHV0	I1HA43	Uncharacterized protein.	Uncharacterized protein.	0.588
A0A0Q3EHV0	I1HF29_BRADI	A0A0Q3EHV0	I1HF29	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.591
A0A0Q3EHV0	I1HF45_BRADI	A0A0Q3EHV0	I1HF45	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.566
A0A0Q3EHV0	I1HFE5_BRADI	A0A0Q3EHV0	I1HFE5	Uncharacterized protein.	Uncharacterized protein.	0.801
A0A0Q3EHV0	I1HK96_BRADI	A0A0Q3EHV0	I1HK96	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.566