(99 nodes) Zinc finger, PHD-type network (Brachypodium distachyon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3KBF3	Uncharacterized protein. (1278 aa)
	A0A0Q3EDG3	PHD-type domain-containing protein. (1461 aa)
	A0A0Q3EJJ0	OBERON-like protein; Probable transcription factor. (597 aa)
	A0A0Q3EJV3	Uncharacterized protein. (409 aa)
	A0A0Q3ETK1	Uncharacterized protein. (2091 aa)
	A0A0Q3EUI2	Uncharacterized protein. (1782 aa)
	A0A0Q3F0H7	PHD-type domain-containing protein. (909 aa)
	A0A0Q3F270	Uncharacterized protein. (792 aa)
	A0A0Q3F3W5	PHD-type domain-containing protein. (230 aa)
	A0A0Q3F6I7	Uncharacterized protein. (2101 aa)
	A0A0Q3FCJ6	Uncharacterized protein. (1723 aa)
	A0A0Q3GGP1	Uncharacterized protein. (1289 aa)
	A0A0Q3GMZ8	Uncharacterized protein. (929 aa)
	A0A0Q3GRN0	PHD domain-containing protein. (688 aa)
	A0A0Q3GUB6	Uncharacterized protein. (689 aa)
	A0A0Q3GUF0	Uncharacterized protein. (1130 aa)
	A0A0Q3H1Q5	PHD-type domain-containing protein. (947 aa)
	A0A0Q3H6M6	Uncharacterized protein. (749 aa)
	A0A0Q3HEA2	Sister chromatid cohesion protein. (1771 aa)
	A0A0Q3IUK0	Uncharacterized protein. (1358 aa)
	A0A0Q3J0G6	Uncharacterized protein. (315 aa)
	A0A0Q3JDD4	Uncharacterized protein. (1041 aa)
	A0A0Q3JDT3	Uncharacterized protein. (2279 aa)
	A0A0Q3JER6	PHD-type domain-containing protein. (263 aa)
	A0A0Q3JH62	Uncharacterized protein. (875 aa)
	A0A0Q3JKJ1	Uncharacterized protein. (199 aa)
	A0A0Q3JME6	Uncharacterized protein. (1351 aa)
	A0A0Q3JQQ9	Uncharacterized protein. (1190 aa)
	A0A0Q3JTH4	Uncharacterized protein. (1476 aa)
	A0A0Q3KKN3	Uncharacterized protein. (346 aa)
	A0A0Q3L223	Uncharacterized protein. (809 aa)
	A0A0Q3L2R1	Uncharacterized protein. (2276 aa)
	A0A0Q3L2R7	PHD-type domain-containing protein. (464 aa)
	A0A0Q3L2U1	PHD-type domain-containing protein. (1042 aa)
	A0A0Q3LGR3	Uncharacterized protein. (298 aa)
	A0A0Q3LH52	Uncharacterized protein. (311 aa)
	A0A0Q3NHQ0	Uncharacterized protein. (450 aa)
	A0A0Q3P1Z1	Uncharacterized protein. (1990 aa)
	A0A0Q3PCD5	Uncharacterized protein. (977 aa)
	A0A0Q3R9D7	Uncharacterized protein. (695 aa)
	A0A0Q3RNF6	Uncharacterized protein. (1377 aa)
	A0A0Q3RXM9	Uncharacterized protein. (1657 aa)
	A0A2K2CGF6	Uncharacterized protein. (1472 aa)
	A0A2K2CSX3	Uncharacterized protein. (1858 aa)
	A0A2K2CTE6	Uncharacterized protein. (432 aa)
	A0A2K2CTV5	Uncharacterized protein. (1886 aa)
	A0A2K2CVK0	Uncharacterized protein. (1795 aa)
	A0A2K2CWT8	Uncharacterized protein. (584 aa)
	A0A2K2D9S7	Uncharacterized protein. (617 aa)
	A0A2K2DGB3	Uncharacterized protein. (416 aa)
	A0A2K2DK04	Uncharacterized protein. (1706 aa)
	A0A2K2DPA6	Uncharacterized protein. (925 aa)
	I1GLL8_BRADI	PHD-type domain-containing protein. (247 aa)
	I1GNB5_BRADI	PHD finger protein ING. (253 aa)
	I1GR42_BRADI	Uncharacterized protein. (1654 aa)
	I1GSG4_BRADI	PHD-type domain-containing protein. (268 aa)
	I1GT17_BRADI	Uncharacterized protein. (1225 aa)
	I1GV01_BRADI	Uncharacterized protein. (1885 aa)
	I1GY74_BRADI	UBR-type domain-containing protein. (413 aa)
	I1GZW7_BRADI	Uncharacterized protein. (1277 aa)
	I1H088_BRADI	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (818 aa)
	I1H0C9_BRADI	Uncharacterized protein. (1334 aa)
	I1H2I6_BRADI	PHD-type domain-containing protein. (246 aa)
	I1H2Z1_BRADI	Uncharacterized protein. (219 aa)
	I1H398_BRADI	PHD-type domain-containing protein. (1536 aa)
	I1H6B2_BRADI	Uncharacterized protein. (836 aa)
	I1H9V1_BRADI	PHD finger protein ING. (245 aa)
	I1HCR1_BRADI	Uncharacterized protein. (596 aa)
	I1HDB2_BRADI	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1010 aa)
	I1HHJ2_BRADI	Uncharacterized protein. (1001 aa)
	I1HHS7_BRADI	Uncharacterized protein. (1026 aa)
	I1HJA8_BRADI	Uncharacterized protein. (789 aa)
	I1HJC1_BRADI	PHD-type domain-containing protein. (260 aa)
	I1HLG8_BRADI	PHD-type domain-containing protein. (260 aa)
	I1HMK4_BRADI	Uncharacterized protein. (873 aa)
	I1HN90_BRADI	Uncharacterized protein. (798 aa)
	I1HPZ9_BRADI	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1037 aa)
	I1HQ84_BRADI	PHD-type domain-containing protein. (1822 aa)
	I1HTX9_BRADI	PHD domain-containing protein. (717 aa)
	I1HWL8_BRADI	Uncharacterized protein. (355 aa)
	I1HWU1_BRADI	PHD domain-containing protein. (244 aa)
	I1HX60_BRADI	Uncharacterized protein. (736 aa)
	I1I747_BRADI	Uncharacterized protein. (214 aa)
	I1IAM7_BRADI	PHD-type domain-containing protein. (258 aa)
	I1IBH4_BRADI	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily. (490 aa)
	I1IDA2_BRADI	PHD-type domain-containing protein. (774 aa)
	I1IIT8_BRADI	Uncharacterized protein. (1029 aa)
	I1IK03_BRADI	OBERON-like protein; Probable transcription factor. (604 aa)
	I1IM81_BRADI	PHD-type domain-containing protein. (253 aa)
	I1IME4_BRADI	PHD domain-containing protein. (715 aa)
	I1INW6_BRADI	PHD domain-containing protein. (120 aa)
	I1IPW3_BRADI	Uncharacterized protein. (216 aa)
	I1IQL6_BRADI	PHD domain-containing protein. (693 aa)
	I1ITL3_BRADI	PHD-type domain-containing protein. (266 aa)
	I1IWI8_BRADI	PHD domain-containing protein. (1002 aa)
	I1IY44_BRADI	PHD-type domain-containing protein. (272 aa)
	I1IZL2_BRADI	Uncharacterized protein. (657 aa)
	I1J0A0_BRADI	PHD finger protein ING. (252 aa)
	I1J3U0_BRADI	Uncharacterized protein. (1416 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3ETK1	A0A0Q3EUI2	A0A0Q3ETK1	A0A0Q3EUI2	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A0Q3ETK1	A0A0Q3FCJ6	A0A0Q3ETK1	A0A0Q3FCJ6	Uncharacterized protein.	Uncharacterized protein.	0.429
A0A0Q3ETK1	A0A0Q3HEA2	A0A0Q3ETK1	A0A0Q3HEA2	Uncharacterized protein.	Sister chromatid cohesion protein.	0.596
A0A0Q3EUI2	A0A0Q3ETK1	A0A0Q3EUI2	A0A0Q3ETK1	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A0Q3EUI2	A0A0Q3L2U1	A0A0Q3EUI2	A0A0Q3L2U1	Uncharacterized protein.	PHD-type domain-containing protein.	0.540
A0A0Q3EUI2	A0A0Q3PCD5	A0A0Q3EUI2	A0A0Q3PCD5	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A0Q3EUI2	A0A2K2CTV5	A0A0Q3EUI2	A0A2K2CTV5	Uncharacterized protein.	Uncharacterized protein.	0.420
A0A0Q3EUI2	A0A2K2DGB3	A0A0Q3EUI2	A0A2K2DGB3	Uncharacterized protein.	Uncharacterized protein.	0.503
A0A0Q3EUI2	A0A2K2DK04	A0A0Q3EUI2	A0A2K2DK04	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A0Q3EUI2	I1J3U0_BRADI	A0A0Q3EUI2	I1J3U0	Uncharacterized protein.	Uncharacterized protein.	0.433
A0A0Q3F3W5	I1HJA8_BRADI	A0A0Q3F3W5	I1HJA8	PHD-type domain-containing protein.	Uncharacterized protein.	0.607
A0A0Q3F6I7	A0A0Q3JTH4	A0A0Q3F6I7	A0A0Q3JTH4	Uncharacterized protein.	Uncharacterized protein.	0.432
A0A0Q3F6I7	A0A2K2DK04	A0A0Q3F6I7	A0A2K2DK04	Uncharacterized protein.	Uncharacterized protein.	0.469
A0A0Q3F6I7	I1GZW7_BRADI	A0A0Q3F6I7	I1GZW7	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A0Q3F6I7	I1H398_BRADI	A0A0Q3F6I7	I1H398	Uncharacterized protein.	PHD-type domain-containing protein.	0.411
A0A0Q3FCJ6	A0A0Q3ETK1	A0A0Q3FCJ6	A0A0Q3ETK1	Uncharacterized protein.	Uncharacterized protein.	0.429
A0A0Q3FCJ6	A0A0Q3L2U1	A0A0Q3FCJ6	A0A0Q3L2U1	Uncharacterized protein.	PHD-type domain-containing protein.	0.569
A0A0Q3FCJ6	A0A0Q3PCD5	A0A0Q3FCJ6	A0A0Q3PCD5	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A0Q3FCJ6	A0A2K2CTV5	A0A0Q3FCJ6	A0A2K2CTV5	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A0Q3FCJ6	A0A2K2DGB3	A0A0Q3FCJ6	A0A2K2DGB3	Uncharacterized protein.	Uncharacterized protein.	0.503