(37 nodes) Ribosomal protein S5 domain 2-type fold, subgroup network (Brachypodium distachyon)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1IB41_BRADI	Uncharacterized protein. (921 aa)
	I1IFS6_BRADI	Uncharacterized protein. (380 aa)
	I1INP1_BRADI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (149 aa)
	I1IP09_BRADI	DNA topoisomerase 6 subunit B; Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity. The B subunit binds ATP; Belongs to the TOP6B family. (688 aa)
	I1IS64_BRADI	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (886 aa)
	I1IUV7_BRADI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (149 aa)
	I1J1J9_BRADI	Uncharacterized protein. (438 aa)
	A0A0Q3E7E5	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (768 aa)
	A0A0Q3H3G3	Uncharacterized protein. (995 aa)
	A0A0Q3HYI8	Uncharacterized protein. (985 aa)
	A0A0Q3J8U5	MDD_C domain-containing protein. (102 aa)
	A0A0Q3REL0	DNA_mis_repair domain-containing protein. (728 aa)
	A0A2K2CST3	Uncharacterized protein. (1223 aa)
	A0A2K2D8C8	Mevalonate kinase. (413 aa)
	A0A2K2DHD7	Tr-type G domain-containing protein. (1011 aa)
	A0A2K2DQJ0	Uncharacterized protein. (194 aa)
	A0A2K2DRG0	RECA_2 domain-containing protein. (629 aa)
	I1GL87_BRADI	Uncharacterized protein. (500 aa)
	I1GLW2_BRADI	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (278 aa)
	I1GMV8_BRADI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (224 aa)
	I1GPY0_BRADI	Tr-type G domain-containing protein. (1048 aa)
	I1GQY0_BRADI	Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial DNA in a site-specific manner; Belongs to the peptidase S16 family. (994 aa)
	I1GRL2_BRADI	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (412 aa)
	I1GXF6_BRADI	Tr-type G domain-containing protein. (995 aa)
	I1GYK4_BRADI	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (758 aa)
	I1H2Q1_BRADI	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (281 aa)
	I1H7D5_BRADI	Uncharacterized protein. (512 aa)
	I1HD01_BRADI	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (324 aa)
	I1HEB4_BRADI	DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner. (723 aa)
	I1HKG6_BRADI	Uncharacterized protein. (171 aa)
	I1HPV9_BRADI	Tr-type G domain-containing protein. (843 aa)
	I1HSJ9_BRADI	GHMP_kinases_N domain-containing protein. (406 aa)
	I1HVJ7_BRADI	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (417 aa)
	I1HVZ5_BRADI	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (516 aa)
	I1I9Y4_BRADI	Tr-type G domain-containing protein. (843 aa)
	I1IA29_BRADI	Tr-type G domain-containing protein. (843 aa)
	I1ICW6_BRADI	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1494 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3E7E5	I1GLW2_BRADI	A0A0Q3E7E5	I1GLW2	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.737
A0A0Q3E7E5	I1GMV8_BRADI	A0A0Q3E7E5	I1GMV8	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.842
A0A0Q3E7E5	I1GRL2_BRADI	A0A0Q3E7E5	I1GRL2	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.842
A0A0Q3E7E5	I1H2Q1_BRADI	A0A0Q3E7E5	I1H2Q1	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.737
A0A0Q3E7E5	I1HD01_BRADI	A0A0Q3E7E5	I1HD01	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.723
A0A0Q3E7E5	I1HVZ5_BRADI	A0A0Q3E7E5	I1HVZ5	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.838
A0A0Q3E7E5	I1INP1_BRADI	A0A0Q3E7E5	I1INP1	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.695
A0A0Q3E7E5	I1IUV7_BRADI	A0A0Q3E7E5	I1IUV7	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.695
A0A0Q3H3G3	A0A0Q3HYI8	A0A0Q3H3G3	A0A0Q3HYI8	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A0Q3H3G3	I1J1J9_BRADI	A0A0Q3H3G3	I1J1J9	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A0Q3HYI8	A0A0Q3H3G3	A0A0Q3HYI8	A0A0Q3H3G3	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A0Q3HYI8	I1J1J9_BRADI	A0A0Q3HYI8	I1J1J9	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A0Q3J8U5	A0A2K2D8C8	A0A0Q3J8U5	A0A2K2D8C8	MDD_C domain-containing protein.	Mevalonate kinase.	0.974
A0A0Q3J8U5	I1H7D5_BRADI	A0A0Q3J8U5	I1H7D5	MDD_C domain-containing protein.	Uncharacterized protein.	0.841
A0A0Q3J8U5	I1HSJ9_BRADI	A0A0Q3J8U5	I1HSJ9	MDD_C domain-containing protein.	GHMP_kinases_N domain-containing protein.	0.499
A0A0Q3REL0	A0A2K2CST3	A0A0Q3REL0	A0A2K2CST3	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.995
A0A0Q3REL0	I1GMV8_BRADI	A0A0Q3REL0	I1GMV8	DNA_mis_repair domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.410
A0A0Q3REL0	I1GRL2_BRADI	A0A0Q3REL0	I1GRL2	DNA_mis_repair domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.410
A0A0Q3REL0	I1IB41_BRADI	A0A0Q3REL0	I1IB41	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.997
A0A2K2CST3	A0A0Q3REL0	A0A2K2CST3	A0A0Q3REL0	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.995