9 items (Brachypodium distachyon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1HXV4_BRADI	Sm domain-containing protein. (86 aa)
	I1IRS8_BRADI	Small nuclear ribonucleoprotein G. (81 aa)
	I1I1N0_BRADI	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)
	A0A0Q3NY79	Sm domain-containing protein. (99 aa)
	I1GSG1_BRADI	Small nuclear ribonucleoprotein G. (80 aa)
	I1GVQ2_BRADI	Sm domain-containing protein. (86 aa)
	I1H5J0_BRADI	MIF4G domain-containing protein. (865 aa)
	I1HW00_BRADI	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. (134 aa)
	I1HWR8_BRADI	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (88 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3NY79	I1GSG1_BRADI	A0A0Q3NY79	I1GSG1	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.993
A0A0Q3NY79	I1GVQ2_BRADI	A0A0Q3NY79	I1GVQ2	Sm domain-containing protein.	Sm domain-containing protein.	0.990
A0A0Q3NY79	I1H5J0_BRADI	A0A0Q3NY79	I1H5J0	Sm domain-containing protein.	MIF4G domain-containing protein.	0.971
A0A0Q3NY79	I1HW00_BRADI	A0A0Q3NY79	I1HW00	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.544
A0A0Q3NY79	I1HWR8_BRADI	A0A0Q3NY79	I1HWR8	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.991
A0A0Q3NY79	I1HXV4_BRADI	A0A0Q3NY79	I1HXV4	Sm domain-containing protein.	Sm domain-containing protein.	0.990
A0A0Q3NY79	I1I1N0_BRADI	A0A0Q3NY79	I1I1N0	Sm domain-containing protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.991
A0A0Q3NY79	I1IRS8_BRADI	A0A0Q3NY79	I1IRS8	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.993
I1GSG1_BRADI	A0A0Q3NY79	I1GSG1	A0A0Q3NY79	Small nuclear ribonucleoprotein G.	Sm domain-containing protein.	0.993
I1GSG1_BRADI	I1GVQ2_BRADI	I1GSG1	I1GVQ2	Small nuclear ribonucleoprotein G.	Sm domain-containing protein.	0.994
I1GSG1_BRADI	I1H5J0_BRADI	I1GSG1	I1H5J0	Small nuclear ribonucleoprotein G.	MIF4G domain-containing protein.	0.964
I1GSG1_BRADI	I1HW00_BRADI	I1GSG1	I1HW00	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.993
I1GSG1_BRADI	I1HWR8_BRADI	I1GSG1	I1HWR8	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.994
I1GSG1_BRADI	I1HXV4_BRADI	I1GSG1	I1HXV4	Small nuclear ribonucleoprotein G.	Sm domain-containing protein.	0.994
I1GSG1_BRADI	I1I1N0_BRADI	I1GSG1	I1I1N0	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.994
I1GSG1_BRADI	I1IRS8_BRADI	I1GSG1	I1IRS8	Small nuclear ribonucleoprotein G.	Small nuclear ribonucleoprotein G.	0.544
I1GVQ2_BRADI	A0A0Q3NY79	I1GVQ2	A0A0Q3NY79	Sm domain-containing protein.	Sm domain-containing protein.	0.990
I1GVQ2_BRADI	I1GSG1_BRADI	I1GVQ2	I1GSG1	Sm domain-containing protein.	Small nuclear ribonucleoprotein G.	0.994
I1GVQ2_BRADI	I1H5J0_BRADI	I1GVQ2	I1H5J0	Sm domain-containing protein.	MIF4G domain-containing protein.	0.967
I1GVQ2_BRADI	I1HW00_BRADI	I1GVQ2	I1HW00	Sm domain-containing protein.	Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.	0.990