19 items (Brachypodium distachyon) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	I1J1Z5_BRADI	Amino_oxidase domain-containing protein. (483 aa)
	I1ISF0_BRADI	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (414 aa)
	I1ISE7_BRADI	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (411 aa)
	I1HTG8_BRADI	Uncharacterized protein. (594 aa)
	I1J381_BRADI	Amino_oxidase domain-containing protein. (492 aa)
	I1J380_BRADI	Amino_oxidase domain-containing protein. (491 aa)
	I1IUR8_BRADI	Uncharacterized protein. (181 aa)
	A0A2K2CSN7	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (409 aa)
	I1GNF7_BRADI	Uncharacterized protein. (154 aa)
	I1H754_BRADI	Uncharacterized protein. (587 aa)
	I1HEB0_BRADI	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	I1HEK5_BRADI	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	I1HFX7_BRADI	Uncharacterized protein. (581 aa)
	A0A0Q3G3Y3	Uncharacterized protein. (597 aa)
	I1HSN7_BRADI	Uncharacterized protein. (183 aa)
	I1IKL1_BRADI	Uncharacterized protein. (193 aa)
	I1HI69_BRADI	Uncharacterized protein. (151 aa)
	I1HI68_BRADI	Uncharacterized protein; Belongs to the calmodulin family. (149 aa)
	I1I3T4_BRADI	Amino_oxidase domain-containing protein. (495 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3G3Y3	I1H754_BRADI	A0A0Q3G3Y3	I1H754	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A0Q3G3Y3	I1HFX7_BRADI	A0A0Q3G3Y3	I1HFX7	Uncharacterized protein.	Uncharacterized protein.	0.487
A0A0Q3G3Y3	I1HTG8_BRADI	A0A0Q3G3Y3	I1HTG8	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A2K2CSN7	I1ISE7_BRADI	A0A2K2CSN7	I1ISE7	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.900
A0A2K2CSN7	I1ISF0_BRADI	A0A2K2CSN7	I1ISF0	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.901
A0A2K2CSN7	I1J1Z5_BRADI	A0A2K2CSN7	I1J1Z5	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Amino_oxidase domain-containing protein.	0.927
A0A2K2CSN7	I1J380_BRADI	A0A2K2CSN7	I1J380	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Amino_oxidase domain-containing protein.	0.933
A0A2K2CSN7	I1J381_BRADI	A0A2K2CSN7	I1J381	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Amino_oxidase domain-containing protein.	0.934
I1H754_BRADI	A0A0Q3G3Y3	I1H754	A0A0Q3G3Y3	Uncharacterized protein.	Uncharacterized protein.	0.901
I1H754_BRADI	I1HTG8_BRADI	I1H754	I1HTG8	Uncharacterized protein.	Uncharacterized protein.	0.901
I1HFX7_BRADI	A0A0Q3G3Y3	I1HFX7	A0A0Q3G3Y3	Uncharacterized protein.	Uncharacterized protein.	0.487
I1HFX7_BRADI	I1HTG8_BRADI	I1HFX7	I1HTG8	Uncharacterized protein.	Uncharacterized protein.	0.487
I1HTG8_BRADI	A0A0Q3G3Y3	I1HTG8	A0A0Q3G3Y3	Uncharacterized protein.	Uncharacterized protein.	0.901
I1HTG8_BRADI	I1H754_BRADI	I1HTG8	I1H754	Uncharacterized protein.	Uncharacterized protein.	0.901
I1HTG8_BRADI	I1HFX7_BRADI	I1HTG8	I1HFX7	Uncharacterized protein.	Uncharacterized protein.	0.487
I1I3T4_BRADI	I1J1Z5_BRADI	I1I3T4	I1J1Z5	Amino_oxidase domain-containing protein.	Amino_oxidase domain-containing protein.	0.910
I1I3T4_BRADI	I1J380_BRADI	I1I3T4	I1J380	Amino_oxidase domain-containing protein.	Amino_oxidase domain-containing protein.	0.909
I1I3T4_BRADI	I1J381_BRADI	I1I3T4	I1J381	Amino_oxidase domain-containing protein.	Amino_oxidase domain-containing protein.	0.911
I1ISE7_BRADI	A0A2K2CSN7	I1ISE7	A0A2K2CSN7	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.900
I1ISE7_BRADI	I1ISF0_BRADI	I1ISE7	I1ISF0	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	Uncharacterized protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.	0.901