(6 nodes) Beta-Casp domain network (Brachypodium distachyon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0Q3GIW8	Beta-Casp domain-containing protein. (781 aa)
	A0A0Q3GLS3	Uncharacterized protein. (768 aa)
	A0A2K2D6B7	Cleavage and polyadenylation specificity factor subunit 2. (739 aa)
	A0A0Q3ERQ8	Uncharacterized protein. (580 aa)
	A0A0Q3EYM6	Cleavage and polyadenylation specificity factor subunit 2. (739 aa)
	I1GKQ1_BRADI	Uncharacterized protein. (690 aa)

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3ERQ8	A0A0Q3EYM6	A0A0Q3ERQ8	A0A0Q3EYM6	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.926
A0A0Q3ERQ8	A0A0Q3GIW8	A0A0Q3ERQ8	A0A0Q3GIW8	Uncharacterized protein.	Beta-Casp domain-containing protein.	0.995
A0A0Q3ERQ8	A0A2K2D6B7	A0A0Q3ERQ8	A0A2K2D6B7	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.926
A0A0Q3EYM6	A0A0Q3ERQ8	A0A0Q3EYM6	A0A0Q3ERQ8	Cleavage and polyadenylation specificity factor subunit 2.	Uncharacterized protein.	0.926
A0A0Q3EYM6	A0A0Q3GLS3	A0A0Q3EYM6	A0A0Q3GLS3	Cleavage and polyadenylation specificity factor subunit 2.	Uncharacterized protein.	0.981
A0A0Q3EYM6	A0A2K2D6B7	A0A0Q3EYM6	A0A2K2D6B7	Cleavage and polyadenylation specificity factor subunit 2.	Cleavage and polyadenylation specificity factor subunit 2.	0.900
A0A0Q3EYM6	I1GKQ1_BRADI	A0A0Q3EYM6	I1GKQ1	Cleavage and polyadenylation specificity factor subunit 2.	Uncharacterized protein.	0.981
A0A0Q3GIW8	A0A0Q3ERQ8	A0A0Q3GIW8	A0A0Q3ERQ8	Beta-Casp domain-containing protein.	Uncharacterized protein.	0.995
A0A0Q3GLS3	A0A0Q3EYM6	A0A0Q3GLS3	A0A0Q3EYM6	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.981
A0A0Q3GLS3	A0A2K2D6B7	A0A0Q3GLS3	A0A2K2D6B7	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.981
A0A0Q3GLS3	I1GKQ1_BRADI	A0A0Q3GLS3	I1GKQ1	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A2K2D6B7	A0A0Q3ERQ8	A0A2K2D6B7	A0A0Q3ERQ8	Cleavage and polyadenylation specificity factor subunit 2.	Uncharacterized protein.	0.926
A0A2K2D6B7	A0A0Q3EYM6	A0A2K2D6B7	A0A0Q3EYM6	Cleavage and polyadenylation specificity factor subunit 2.	Cleavage and polyadenylation specificity factor subunit 2.	0.900
A0A2K2D6B7	A0A0Q3GLS3	A0A2K2D6B7	A0A0Q3GLS3	Cleavage and polyadenylation specificity factor subunit 2.	Uncharacterized protein.	0.981
A0A2K2D6B7	I1GKQ1_BRADI	A0A2K2D6B7	I1GKQ1	Cleavage and polyadenylation specificity factor subunit 2.	Uncharacterized protein.	0.981
I1GKQ1_BRADI	A0A0Q3EYM6	I1GKQ1	A0A0Q3EYM6	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.981
I1GKQ1_BRADI	A0A0Q3GLS3	I1GKQ1	A0A0Q3GLS3	Uncharacterized protein.	Uncharacterized protein.	0.900
I1GKQ1_BRADI	A0A2K2D6B7	I1GKQ1	A0A2K2D6B7	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.981