STRINGSTRING
A0A0Q3F662 A0A0Q3F662 A0A0Q3HB04 A0A0Q3HB04 A0A0Q3HJP2 A0A0Q3HJP2 A0A0Q3HUL9 A0A0Q3HUL9 A0A0Q3HYH0 A0A0Q3HYH0 A0A0Q3IS59 A0A0Q3IS59 A0A0Q3IW44 A0A0Q3IW44 A0A0Q3JFY8 A0A0Q3JFY8 A0A0Q3JTA2 A0A0Q3JTA2 A0A0Q3NMS6 A0A0Q3NMS6 A0A0Q3QCT5 A0A0Q3QCT5 A0A2K2CPR4 A0A2K2CPR4 A0A2K2CTI5 A0A2K2CTI5 A0A2K2DFJ1 A0A2K2DFJ1 I1GL73_BRADI I1GL73_BRADI I1GVF3_BRADI I1GVF3_BRADI I1GZF6_BRADI I1GZF6_BRADI I1H1P9_BRADI I1H1P9_BRADI I1HA74_BRADI I1HA74_BRADI I1HF79_BRADI I1HF79_BRADI I1HFY5_BRADI I1HFY5_BRADI I1HGA3_BRADI I1HGA3_BRADI I1HH26_BRADI I1HH26_BRADI I1HSH9_BRADI I1HSH9_BRADI I1I197_BRADI I1I197_BRADI I1I2Q5_BRADI I1I2Q5_BRADI I1I843_BRADI I1I843_BRADI I1IA68_BRADI I1IA68_BRADI I1IAG9_BRADI I1IAG9_BRADI I1IDN4_BRADI I1IDN4_BRADI I1IM16_BRADI I1IM16_BRADI I1IRX3_BRADI I1IRX3_BRADI I1IS90_BRADI I1IS90_BRADI I1IT16_BRADI I1IT16_BRADI I1ITK1_BRADI I1ITK1_BRADI I1IVD5_BRADI I1IVD5_BRADI I1IZB9_BRADI I1IZB9_BRADI I1J2D5_BRADI I1J2D5_BRADI I1J398_BRADI I1J398_BRADI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A0A0Q3F662POLAc domain-containing protein. (1026 aa)
A0A0Q3HB04Poly [ADP-ribose] polymerase. (981 aa)
A0A0Q3HJP2Uncharacterized protein. (274 aa)
A0A0Q3HUL9DNA ligase. (918 aa)
A0A0Q3HYH0DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (533 aa)
A0A0Q3IS59Uncharacterized protein. (520 aa)
A0A0Q3IW44Uncharacterized protein. (406 aa)
A0A0Q3JFY8Uncharacterized protein. (426 aa)
A0A0Q3JTA2Uncharacterized protein. (303 aa)
A0A0Q3NMS6ENDO3c domain-containing protein. (277 aa)
A0A0Q3QCT5DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2214 aa)
A0A2K2CPR4DNA polymerase. (1135 aa)
A0A2K2CTI5PCNA_C domain-containing protein. (188 aa)
A0A2K2DFJ1SAP domain-containing protein. (825 aa)
I1GL73_BRADIFlap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (413 aa)
I1GVF3_BRADIFPG_CAT domain-containing protein. (402 aa)
I1GZF6_BRADIDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (552 aa)
I1H1P9_BRADIBRCT domain-containing protein. (356 aa)
I1HA74_BRADIUncharacterized protein. (429 aa)
I1HF79_BRADIPoly [ADP-ribose] polymerase. (736 aa)
I1HFY5_BRADIENDO3c domain-containing protein. (325 aa)
I1HGA3_BRADIENDO3c domain-containing protein. (281 aa)
I1HH26_BRADIFlap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
I1HSH9_BRADIUncharacterized protein. (380 aa)
I1I197_BRADIUncharacterized protein. (122 aa)
I1I2Q5_BRADIFPG_CAT domain-containing protein. (448 aa)
I1I843_BRADIUncharacterized protein. (350 aa)
I1IA68_BRADIPoly [ADP-ribose] polymerase. (824 aa)
I1IAG9_BRADIENDO3c domain-containing protein. (407 aa)
I1IDN4_BRADIProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (263 aa)
I1IM16_BRADIEndonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (370 aa)
I1IRX3_BRADIUncharacterized protein. (131 aa)
I1IS90_BRADIUncharacterized protein. (624 aa)
I1IT16_BRADICBFD_NFYB_HMF domain-containing protein. (178 aa)
I1ITK1_BRADIAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (461 aa)
I1IVD5_BRADIUncharacterized protein. (606 aa)
I1IZB9_BRADIUncharacterized protein. (387 aa)
I1J2D5_BRADIPOLAc domain-containing protein. (1031 aa)
I1J398_BRADIUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (310 aa)
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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