Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIM35685.1 | AIM35687.1 | KO02_02590 | KO02_02600 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| AIM35685.1 | AIM35800.1 | KO02_02590 | KO02_03240 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malic enzyme; NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.408 |
| AIM35685.1 | AIM36690.1 | KO02_02590 | KO02_08195 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.903 |
| AIM35685.1 | AIM37048.1 | KO02_02590 | KO02_10340 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
| AIM35685.1 | AIM37055.1 | KO02_02590 | KO02_10375 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.981 |
| AIM35685.1 | AIM38211.1 | KO02_02590 | KO02_17125 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. | 0.698 |
| AIM35685.1 | fumC | KO02_02590 | KO02_20570 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.954 |
| AIM35685.1 | gabD | KO02_02590 | KO02_18930 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.913 |
| AIM35685.1 | sdhA | KO02_02590 | KO02_02595 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| AIM35685.1 | sucC | KO02_02590 | KO02_03645 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.981 |
| AIM35685.1 | sucD | KO02_02590 | KO02_04310 | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinate--CoA ligase; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.985 |
| AIM35687.1 | AIM35685.1 | KO02_02600 | KO02_02590 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| AIM35687.1 | AIM36690.1 | KO02_02600 | KO02_08195 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
| AIM35687.1 | AIM37048.1 | KO02_02600 | KO02_10340 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate-semialdehyde dehydrogenase; In Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AIM35687.1 | AIM37055.1 | KO02_02600 | KO02_10375 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.729 |
| AIM35687.1 | fumC | KO02_02600 | KO02_20570 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.900 |
| AIM35687.1 | gabD | KO02_02600 | KO02_18930 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| AIM35687.1 | sdhA | KO02_02600 | KO02_02595 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| AIM35687.1 | sucC | KO02_02600 | KO02_03645 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.919 |
| AIM35687.1 | sucD | KO02_02600 | KO02_04310 | Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | succinate--CoA ligase; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.918 |
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