(7 nodes) Protein of unknown function DUF3526, and ABC transporter-like, conserved site network (Sphingobacterium sp. ML3W)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIM38375.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (59 aa)
	AIM38376.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
	AIM38377.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (459 aa)
	AIM38378.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	AIM39043.1	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
	AIM39044.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
	AIM39045.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)

Your Current Organism:

Sphingobacterium sp. ML3W

NCBI taxonomy Id: 1538644
Other names: S. sp. ML3W

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIM38375.1	AIM38376.1	KO02_18030	KO02_18035	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AIM38375.1	AIM38377.1	KO02_18030	KO02_18040	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
AIM38375.1	AIM38378.1	KO02_18030	KO02_18045	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.495
AIM38376.1	AIM38375.1	KO02_18035	KO02_18030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
AIM38376.1	AIM38377.1	KO02_18035	KO02_18040	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
AIM38376.1	AIM38378.1	KO02_18035	KO02_18045	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.881
AIM38376.1	AIM39043.1	KO02_18035	KO02_21915	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
AIM38376.1	AIM39044.1	KO02_18035	KO02_21920	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.782
AIM38377.1	AIM38375.1	KO02_18040	KO02_18030	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.773
AIM38377.1	AIM38376.1	KO02_18040	KO02_18035	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.952
AIM38377.1	AIM38378.1	KO02_18040	KO02_18045	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
AIM38377.1	AIM39043.1	KO02_18040	KO02_21915	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.893
AIM38377.1	AIM39045.1	KO02_18040	KO02_21925	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
AIM38378.1	AIM38375.1	KO02_18045	KO02_18030	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.495
AIM38378.1	AIM38376.1	KO02_18045	KO02_18035	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.881
AIM38378.1	AIM38377.1	KO02_18045	KO02_18040	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.946
AIM38378.1	AIM39044.1	KO02_18045	KO02_21920	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
AIM38378.1	AIM39045.1	KO02_18045	KO02_21925	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.888
AIM39043.1	AIM38376.1	KO02_21915	KO02_18035	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.775
AIM39043.1	AIM38377.1	KO02_21915	KO02_18040	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.893